PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2kkoB_

Fold library id	PDB Header	Molecule	Title
c2kkoB_	PDB header: dna binding protein	Chain: B: PDB Molecule: possible transcriptional regulatory protein	PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e.

Links to external resources
Added to library: Sat Aug 28 18:03:45 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M A G Q S D R K A A L L D Q V A R V G K A L A N G R R L Q I L D L L A Q G E R A V E A I A T A T G M N L T T A S A N L Q A L K S G G L V E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T
T
T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . .

Sequence R R E G T R Q Y Y R I A G E D V A R L F A L V Q V V A D E H L E H H H H H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	A	G	Q	S	D	R	K	A	A	L	L	D	Q	V	A	R	V	G	K	A	L	A	N	G	R	R	L	Q	I	L	D	L	L	A	Q	G	E	R	A	V	E	A	I	A	T	A	T	G	M	N	L	T	T	A	S	A	N	L	Q	A	L	K	S	G	G	L	V	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T												T	T													T																	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Sequence	R	R	E	G	T	R	Q	Y	Y	R	I	A	G	E	D	V	A	R	L	F	A	L	V	Q	V	V	A	D	E	H	L	E	H	H	H	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T							S																			S