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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c2k7mA_ | PDB header: membrane protein | Chain: A: PDB Molecule: gap junction alpha-5 protein; | PDBTitle: structure of the connexin40 carboxyl terminal domain |
| Added to library: Sun Aug 29 04:19:46 2010 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| Sequence | G | P | L | G | S | T | S | L | V | Q | G | L | T | P | P | P | D | F | N | Q | C | L | K | N | S | P | D | E | K | F | F | S | D | F | S | N | N | M | G | S | R | K | N | P | D | P | L | A | T | E | E | V | P | N | Q | E | Q | I | P | E | E | G | F | I | H | T | Q | Y | G | Q |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T | T | S | S | S | S | S | S | T | T | T | T | S | S | S | T | T | S | S | T | T | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
| Sequence | K | P | E | Q | P | S | G | A | S | A | G | H | R | F | P | Q | G | Y | H | S | D | K | R | R | L | S | K | A | S | S | K | A | R | S | D | D | L | S | V | |||||||||||||||||||||||||||||||
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | S | T | T | T | S | T | T | S | T | T | T | T |
| Download: | PDB structure | FASTA sequence |
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