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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2jsnA_ | PDB header: protein transport | Chain: A: PDB Molecule: trafficking protein particle complex subunit 4; | PDBTitle: solution structure of the atypical pdz-like domain of2 synbindin |
Added to library: Tue Mar 16 13:55:50 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | M | G | H | H | H | H | H | H | L | D | S | Y | A | P | R | A | E | A | E | K | T | F | S | Y | P | L | D | L | L | L | K | L | H | D | E | R | V | L | V | A | F | G | Q | R | D | G | I | R | V | G | H | A | V | L | A | I | N | G | M | D | V | N | G | R | Y | T | A | D | G | K |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | T | T | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | B | T | T | B | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
Sequence | E | V | L | E | Y | L | G | N | P | A | N | Y | P | V | S | I | R | F | G | R | P | R | L | T | S | N | ||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | G | G | G | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S |
Download: | PDB structure | FASTA sequence |
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