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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2jiiA_

Fold library idPDB HeaderMoleculeTitle
c2jiiA_PDB header: transferaseChain: A: PDB Molecule: serine/threonine-protein kinase vrk3 molecule:PDBTitle: structure of vaccinia related kinase 3


Added to library: Tue Mar 16 12:28:38 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YFQSMTTSLEALPTGTVLTDKSGRQWKLKSFQTRDNQGILYEAAPTSKFSLKLDAKDGRLFNEQNFFQRA
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Known secondary structure (DSSP)
S



TT

TTS
TT


TTST
 .........80.........90.........100.........110.........120.........130.........140
Sequence AKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLL
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Known secondary structure (DSSP)

TT
TT
S




TTT


SGGG


 .........150.........160.........170.........180.........190.........200.........210
Sequence DALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDL
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Known secondary structure (DSSP) TT
B
S


GGGTT

GGG
B
SSGGG





TTSS
TT
S
TTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence HKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKY
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Known secondary structure (DSSP) TT



S

TTGGGTT
S



TTS



 .........290.........300.........310.........320.
Sequence LKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIGLPM
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Known secondary structure (DSSP) T

TT



TT

TTS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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