Fold library entry viewer: c2j7nA_

Added to library: Tue Mar 16 13:03:03 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	A	P	V	V	A	A	R	L	R	N	I	W	P	K	F	P	K	W	L	H	E	A	P	L	A	V	A	W	E	V	T	R	L	F	M	H	C	K	V	D	L	E	D	E	S	L	G	L	K	Y	D	P	S	W	S	T	A	R	D	V	T	D	I	W	K	T	L	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	S	S	S	S	S		S					G	G	G	T	T																	T			T	T		T	T	T	T					G	G	G	G	G		S	S	G	G	G	G	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	D	A	F	R	G	K	P	F	P	E	K	P	P	N	D	V	F	V	T	A	M	T	G	N	F	E	S	K	G	S	A	V	V	L	S	A	V	L	D	Y	N	P	D	N	S	P	T	A	P	L	Y	L	V	K	L	K	P	L	M	F	E	Q	G	C	R	L	T	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T					S		S														S	T	T			T	T													S			S	T	T	S		S														B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	G	P	D	R	F	F	E	I	L	I	P	S	P	T	S	T	S	P	S	V	P	P	V	V	S	K	Q	P	A	A	V	E	E	V	I	Q	W	L	T	M	G	Q	H	S	L	V	G	R	Q	W	R	A	F	F	A	K	D	A	G	P	K	P	I	I	K	E	R	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G									T	T				S	S	S		T	T	S	S	S	S	S	S											S	S					T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	F	A	E	T	G	I	T	F	R	P	D	V	F	Q	R	T	E	F	K	V	S	Q	M	L	D	W	L	L	Q	L	D	N	N	T	W	Q	P	H	L	K	L	F	S	R	I	Q	L	G	L	S	K	T	Y	A	I	M	T	L	E	P	H	Q	I	R	H	H	K	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T		B							B														G	G	G		T	T	S	B							T	T					S	B									G	G	G					S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	L	S	P	S	G	T	G	E	V	M	N	D	G	V	G	R	M	S	R	S	V	A	K	R	I	R	D	V	L	G	L	G	D	V	P	S	A	V	Q	G	R	F	G	S	A	K	G	M	W	V	I	D	V	D	D	T	G	D	E	D	W	I	E	T	Y	P	S	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		T	T	S	S			B	S	S	T	T																	T		S	S			S							T	T									T	T			S									T	T	T	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	W	E	C	D	F	V	D	K	H	Q	R	T	L	E	V	R	S	V	A	S	E	L	K	S	A	G	L	N	L	Q	L	L	P	V	L	E	D	R	A	R	D	K	V	K	M	R	Q	A	I	G	D	R	L	I	N	D	L	Q	R	Q	F	S	E	Q	K	H	A	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S						S	G	G	G	S																B		T	T	T							T	B	S	S																											T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	P	V	E	F	R	Q	W	V	Y	E	S	Y	S	S	R	A	T	R	V	S	H	G	R	V	P	F	L	A	G	L	P	D	S	Q	E	E	T	L	N	F	L	M	N	S	G	F	D	P	K	K	Q	K	Y	L	Q	D	I	A	W	D	L	Q	K	R	K	C	D	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												S										T	S					T	T			S	S											T	T			T	T	T	B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	S	K	L	N	I	R	V	G	R	S	A	Y	I	Y	M	I	A	D	F	W	G	V	L	E	E	N	E	V	H	V	G	F	S	S	K	F	R	D	E	E	E	S	F	T	L	L	S	D	C	D	V	L	V	A	R	S	P	A	H	F	P	S	D	I	Q	R	V	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						B			S	S										T	T	S				T	T													T	T								S								S	S			S	G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	F	K	P	E	L	H	S	L	K	D	V	I	I	F	S	T	K	G	D	V	P	L	A	K	K	L	S	G	G	D	Y	D	G	D	M	A	W	V	C	W	D	P	E	I	V	D	G	F	V	N	A	E	M	P	L	E	P	D	L	S	R	Y	L	K	K	D	K	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	T	T			S						S		S	S	S						T	T	T			S	S	S														T	B												T	T	T	S						B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	F	K	Q	L	M	A	S	H	G	T	G	S	A	A	K	E	Q	T	T	Y	D	M	I	Q	K	S	F	H	F	A	L	Q	P	N	F	L	G	M	C	T	N	Y	K	E	R	L	C	Y	I	N	N	S	V	S	N	K	P	A	I	I	L	S	S	L	V	G	N	L	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T		S	S																				T	S																			T		S	S	S														T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Q	S	K	Q	G	I	V	F	N	E	A	S	W	A	Q	L	R	R	E	L	L	G	G	A	L	S	L	P	D	P	M	Y	K	S	D	S	W	L	G	R	G	E	P	T	H	I	I	D	Y	L	K	F	S	I	A	R	P	A	I	D	K	E	L	E	A	F	H	N	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T																S			S	S						G	G	G	S	S	S			S	S	S	S			S								T	T										S	S	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	K	A	A	K	D	T	E	D	G	A	H	F	W	D	P	D	L	A	S	Y	Y	T	F	F	K	E	I	S	D	K	S	R	S	S	A	L	L	F	T	T	L	K	N	R	I	G	E	V	E	K	E	Y	G	R	D	P	Y	P	V	R	V	N	Q	V	Y	E	K	W	C	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S	S	S	S				B	S			G	G	G	G								T	T	T	S	S		S	S																																					T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	I	T	P	S	K	V	I	R	L	L	E	L	S	F	L	A	D	R	E	M	N	T	W	A	L	L	R	A	S	T	A	F	K	L	Y	Y	H	K	S	P	K	F	V	W	Q	M	A	G	R	Q	L	A	Y	I	K	A	Q	M	T	S	R	P	G	E	G	A	P	A	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T								T	T	S	S		G	G	G	S															T	T	T																					T			T	T	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.
Sequence	T	A	F	M	Y	A	G	L	M	P	D	K	K	F	T	K	Q	Y	V	A	R	L	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T																T

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PDB structure

FASTA sequence

Hidden Markov model

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