PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2izoA_

Fold library id	PDB Header	Molecule	Title
c2izoA_	PDB header: hydrolase	Chain: A: PDB Molecule: flap structure-specific endonuclease;	PDBTitle: structure of an archaeal pcna1-pcna2-fen1 complex

Links to external resources
Added to library: Tue Mar 16 12:44:14 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M D L V K D V K R E L S F S E L K G K R V S I D G Y N A L Y Q F L A A I R Q P P L M D S Q G R V T S H L S G L F Y R T I N I L E E G V I P I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
B
S S S
B
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y V F D G S N I M V E E S K K L L R A M G I P I V Q A P S E G E A E A A Y L N K L G L S W A A A S Q D Y D A I L F G A K R L V R N L T I Y V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S
T T S S S
S S S T T
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E I K P E L I E T E I L L K K L G I T R E Q L I D I G I L I G T D Y N P D G I R G I G P E R A L K I I K K Y G K I I D E I R G L F L N P Q V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S S T T
S T T
S S
T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . .

Sequence V K P E A L D L N E P N G E D I I N I L V Y E H N F S E E R V K N G I E R L T K A I K E A K G A S R Q T G L D R W F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T
T
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	L	V	K	D	V	K	R	E	L	S	F	S	E	L	K	G	K	R	V	S	I	D	G	Y	N	A	L	Y	Q	F	L	A	A	I	R	Q	P	P	L	M	D	S	Q	G	R	V	T	S	H	L	S	G	L	F	Y	R	T	I	N	I	L	E	E	G	V	I	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T																	S							B		S	S	S		B																		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	V	F	D	G	S	N	I	M	V	E	E	S	K	K	L	L	R	A	M	G	I	P	I	V	Q	A	P	S	E	G	E	A	E	A	A	Y	L	N	K	L	G	L	S	W	A	A	A	S	Q	D	Y	D	A	I	L	F	G	A	K	R	L	V	R	N	L	T	I	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T							S	S												T	T	S	S	S					S	S	S					T	T		S					S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	I	K	P	E	L	I	E	T	E	I	L	L	K	K	L	G	I	T	R	E	Q	L	I	D	I	G	I	L	I	G	T	D	Y	N	P	D	G	I	R	G	I	G	P	E	R	A	L	K	I	I	K	K	Y	G	K	I	I	D	E	I	R	G	L	F	L	N	P	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T																S	S	S	T	T		S	T	T													S	S				T	T							S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Sequence	V	K	P	E	A	L	D	L	N	E	P	N	G	E	D	I	I	N	I	L	V	Y	E	H	N	F	S	E	E	R	V	K	N	G	I	E	R	L	T	K	A	I	K	E	A	K	G	A	S	R	Q	T	G	L	D	R	W	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	T	T	T																										T				G	G	G