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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2istA_

Fold library idPDB HeaderMoleculeTitle
c2istA_PDB header: isomeraseChain: A: PDB Molecule: ribosomal large subunit pseudouridine synthase d;PDBTitle: crystal structure of rlud from e. coli


Added to library: Thu Jan 10 00:32:35 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAINAEI
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Known secondary structure (DSSP)



GGGTT
B
TTS
TT
TT


TT
B

SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence ERFEPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTG
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SS
SS

SS
BTTBSSSS
GGGGGSGGGGB
S


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRI
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Known secondary structure (DSSP) SSTT

S







SS
TT

TTSB

 .........220.........230.........240.........250.........260.........270.........280
Sequence MEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATML
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Known secondary structure (DSSP)
SSSS

TTTT

BTT
TTT

S



TT



S
S
 .........290.........300.........310.........320.
Sequence RLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVDW
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Known secondary structure (DSSP)
TTT





TTSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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