Fold library entry viewer: c2is6B_

Added to library: Tue Mar 16 14:07:10 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	V	S	Y	L	L	D	S	L	N	D	K	Q	R	E	A	V	A	A	P	R	S	N	L	L	V	L	A	G	A	G	S	G	K	T	R	V	L	V	H	R	I	A	W	L	M	S	V	E	N	C	S	P	Y	S	I	M	A	V	T	F	T	N	K	A	A	A	E	M	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T										T			S	S								T	T	S	S															T	S				G	G	G						S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	R	I	G	Q	L	M	G	T	S	Q	G	G	M	W	V	G	T	F	H	G	L	A	H	R	L	L	R	A	H	H	M	D	A	N	L	P	Q	D	F	Q	I	L	D	S	E	D	Q	L	R	L	L	K	R	L	I	K	A	M	N	L	D	E	K	Q	W	P	P	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T	T	T																	T					T			T	T																				T	T			T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	M	W	Y	I	N	S	Q	K	D	E	G	L	R	P	H	H	I	N	P	V	E	Q	T	W	Q	K	V	Y	Q	A	Y	Q	E	A	C	D	R	A	G	L	V	D	F	A	E	L	L	L	R	A	H	E	L	W	L	N	K	P	H	I	L	Q	H	Y	R	E	R	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T			S																									T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	I	L	V	D	E	F	Q	D	T	N	N	I	Q	Y	A	W	I	R	L	L	A	G	D	T	G	K	V	M	I	V	G	D	D	D	Q	S	I	Y	G	W	R	G	A	Q	V	E	N	I	Q	R	F	L	N	D	F	P	G	A	E	T	I	R	L	E	Q	N	Y	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	G	G	G														T	T	T									G	G	G				G	G	G	T			T										S	T	T								B			S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	S	N	I	L	S	A	A	N	A	L	I	E	N	N	N	G	R	L	G	K	K	L	W	T	D	G	A	D	G	E	P	I	S	L	Y	C	A	F	N	E	L	D	E	A	R	F	V	V	N	R	I	K	T	W	Q	D	N	G	G	A	L	A	E	C	A	I	L	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S	T	T							B		S	S				S								S	S																		T	T			G	G	G						S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	N	A	Q	S	R	V	L	E	E	A	L	L	Q	A	S	M	P	Y	R	I	Y	G	G	M	R	F	F	E	R	Q	E	I	K	D	A	L	S	Y	L	R	L	I	V	N	R	N	D	D	A	A	F	E	R	V	V	N	T	P	T	R	G	I	G	D	R	T	L	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	G	G	G											T	T							S	S	S		G	G	G	S																T	T									T	T	S	S			S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	R	Q	T	S	R	D	R	Q	L	T	L	W	Q	A	C	R	E	L	L	Q	E	K	A	L	A	G	R	A	A	S	A	L	Q	R	F	M	E	L	I	D	A	L	A	Q	E	T	A	D	M	P	L	H	V	Q	T	D	R	V	I	K	D	S	G	L	R	T	M	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S												T	T		S																						T	T	T	S													T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	E	K	G	E	K	G	Q	T	R	I	E	N	L	E	E	L	V	T	A	T	R	Q	F	S	E	D	L	M	P	L	Q	A	F	L	S	H	A	A	L	E	A	G	E	G	Q	A	D	T	W	Q	D	A	V	Q	L	M	T	L	H	S	A	K	G	L	E	F	P	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		T	T	T																	S					S													T	G	G	G		S				S													T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	I	V	G	M	E	E	G	M	F	P	S	Q	M	S	L	D	E	G	G	R	L	E	E	E	R	R	L	A	Y	V	G	V	T	R	A	M	Q	K	L	T	L	T	Y	A	E	T	R	R	L	Y	G	K	E	V	Y	H	R	P	S	R	F	I	G	E	L	P	E	E	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						B	T	B	B	T	T	B	G	G	G	G	S	S	T	T														T	T											S					T	T							B							S		T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
Sequence	V	E	E	V	R	L	R	A	T	V	S	R	P	V	S	H	Q	R	M	G	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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