Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2iksA_

Fold library idPDB HeaderMoleculeTitle
c2iksA_PDB header: transcriptionChain: A: PDB Molecule: dna-binding transcriptional dual regulator;PDBTitle: crystal structure of n-terminal truncated dna-binding2 transcriptional dual regulator from escherichia coli k12


Added to library: Tue Mar 16 13:51:39 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEXRCIEHLLQRQVDAIIVSTSLP
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)



S
S
STT

TT
TT
S

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PEHPFYQRWANDPFPIVALDRALDREHFTSVVGADQDDAEXLAEELRKFPAETVLYLGALPELSVSFLRE
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) TT
TTTTSSS
S


TTT

TS

SS
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QGFRTAWKDDPREVHFLYANSYEREAAAQLFEKWLETHPXPQALFTTSFALLQGVXDVTLRRDGKLPSDL
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) TT



SSS
TTTS


SSSSS

SS
 .........220.........230.........240.........250.........260.........270......
Sequence AIATFGDNELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS
Predicted secondary structure




















SS confidence

































































Known secondary structure (DSSP) S

GGGGG
SS

SSS





GGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D