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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2ihnA_

Fold library idPDB HeaderMoleculeTitle
c2ihnA_PDB header: hydrolase/dnaChain: A: PDB Molecule: ribonuclease h;PDBTitle: co-crystal of bacteriophage t4 rnase h with a fork dna2 substrate


Added to library: Tue Mar 16 12:42:40 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDLEMMLDEDYKEGICLIDFSQIALSTALVNFPDKEKINLSMVRHLILNSIKFNVKKAKTLGYTKIVLCI
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Known secondary structure (DSSP)






S

SS
TS
SSS


TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DNAKSGYWRRDFAYYYKKNRSTWDWEGYFESSHKVIDELKAYMPYIVMDIDKYEANDHIAVLVKKFSLEG
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Known secondary structure (DSSP)


TT


TTTTT



S
SSS

TT

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence HKILIISSDGDFTQLHKYPNVKQWSPMHKKWVKIKSGSAEIDCMTKILKGDKKDNVASVKVRSDFWFTRV
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Known secondary structure (DSSP)



GGGGGGGGSSS
TTT
SB



SS

BGGGTB

TTS
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence EGERTPSMKTSIVEAIANDREQAKVLLTESEYNRYKENLVLIDFDYIPDNIASNIVNYYNSYKLPPRGKI
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Known secondary structure (DSSP) TT







GGGS

GGGS
T




TTTT
 .........290.........
Sequence YSYFVKAGLSKLTNSINEF
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Known secondary structure (DSSP) T
TTTTTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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