PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2icuB_

Fold library id	PDB Header	Molecule	Title
c2icuB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: hypothetical protein yedk;	PDBTitle: crystal structure of hypothetical protein yedk from2 escherichia coli

Links to external resources
Added to library: Tue Mar 16 13:06:18 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G R F A Q S Q T R E D Y L A L L A E D I E R D I P Y D P E P I G R Y N V A P G T K V L L L S E R D E H L H L D P V F W G Y A P G W D K P P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T
G G G B
S
T T S T T B
B
B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I N A R V E T A A T S R X F K P L W Q H G R A I C F A D G W F E W K Q P F F I Y R A D G Q P I F X A A I G S T P F E R G D E A E G F L I V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T
S
T T
S
G G G
S S B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A A A D Q G L V D I H D R R P L V L S P E A A R E W X R Q E I S G K E A S E I A A S G C V P A N Q F S W H P V S R A V G N V K N Q G A E L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G G T
S
T T
B
G G G
G G G G S T T
G G G G

. . .

Sequence Q P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	R	F	A	Q	S	Q	T	R	E	D	Y	L	A	L	L	A	E	D	I	E	R	D	I	P	Y	D	P	E	P	I	G	R	Y	N	V	A	P	G	T	K	V	L	L	L	S	E	R	D	E	H	L	H	L	D	P	V	F	W	G	Y	A	P	G	W	D	K	P	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S							T	T	T			G	G	G	B							S									T	T	S									T	T									B		B									B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	N	A	R	V	E	T	A	A	T	S	R	X	F	K	P	L	W	Q	H	G	R	A	I	C	F	A	D	G	W	F	E	W	K	Q	P	F	F	I	Y	R	A	D	G	Q	P	I	F	X	A	A	I	G	S	T	P	F	E	R	G	D	E	A	E	G	F	L	I	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		T	T	T														S														T	T												S		G	G	G			S	S	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	A	A	D	Q	G	L	V	D	I	H	D	R	R	P	L	V	L	S	P	E	A	A	R	E	W	X	R	Q	E	I	S	G	K	E	A	S	E	I	A	A	S	G	C	V	P	A	N	Q	F	S	W	H	P	V	S	R	A	V	G	N	V	K	N	Q	G	A	E	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	G	G	T		S																	T	T														B			G	G	G								G	G	G	G	S	T	T				G	G	G	G
	.	.	.
Sequence	Q	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S