PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2i9iA_

Fold library id	PDB Header	Molecule	Title
c2i9iA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: hypothetical protein;	PDBTitle: crystal structure of helicobacter pylori protein hp0492

Links to external resources
Added to library: Tue Mar 16 12:46:35 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E R M K T S S E H V T P L D F N Y P I H I V Q A P Q N H H V V G I L T P R I Q V S D N L K P Y I D K F Q D A L I N Q I Q T I F E K R G Y Q V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L R F Q D E K A L N A Q D K R K I F S V L D L K G W V G I L E D L K M N L K D P N N P N L D T L V D Q S S G S V W F N F Y E P E S N R V V H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S G G G S
S
T T
T T
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D F A V E V G T F Q A M T Y T Y K H N N S G G L N S S N S I I H E Y L E K N K E D A I H K I L N R M Y A V V M K K A V T E L T K E N I D K Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T T
G G G
T T T

. . . . . . . . . 220 .

Sequence R E A I D R M K G F K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	R	M	K	T	S	S	E	H	V	T	P	L	D	F	N	Y	P	I	H	I	V	Q	A	P	Q	N	H	H	V	V	G	I	L	T	P	R	I	Q	V	S	D	N	L	K	P	Y	I	D	K	F	Q	D	A	L	I	N	Q	I	Q	T	I	F	E	K	R	G	Y	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S																																		G	G	G																						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	R	F	Q	D	E	K	A	L	N	A	Q	D	K	R	K	I	F	S	V	L	D	L	K	G	W	V	G	I	L	E	D	L	K	M	N	L	K	D	P	N	N	P	N	L	D	T	L	V	D	Q	S	S	G	S	V	W	F	N	F	Y	E	P	E	S	N	R	V	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	G	G	G	S									S																						T	T		T	T																			T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	F	A	V	E	V	G	T	F	Q	A	M	T	Y	T	Y	K	H	N	N	S	G	G	L	N	S	S	N	S	I	I	H	E	Y	L	E	K	N	K	E	D	A	I	H	K	I	L	N	R	M	Y	A	V	V	M	K	K	A	V	T	E	L	T	K	E	N	I	D	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T		S			T	T	T				G	G	G																																		T	T	T
	.	.	.	.	.	.	.	.	.	220	.
Sequence	R	E	A	I	D	R	M	K	G	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T