PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2i2oB_

Fold library id	PDB Header	Molecule	Title
c2i2oB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: eif4g-like protein;	PDBTitle: crystal structure of an eif4g-like protein from danio rerio

Links to external resources
Added to library: Tue Mar 16 13:14:13 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D Y K I Q S F D L E T Q K L L K T A L K D P G S V D L E K V S S V I V D Q S L K D Q V F S R E A G R I C Y T I V Q A E A K Q T N G S V F R R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
G G G S
T T
T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N L L N R L Q Q E F K A R E E T R K R S T Q E W V C L V S F I C N I F D Y L K V N N X P X V A L V H P V Y D C L F R L A Q S D A L K N E E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
B T T B
G G G T S T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V D C L V L Q L H R I G D Q L E K X N V Q L X D E L F N L L R D G F L L Q E D L S S X G R L L L L E I L E F R A G G W K L S D T A Q K Y Y Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S
T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	Y	K	I	Q	S	F	D	L	E	T	Q	K	L	L	K	T	A	L	K	D	P	G	S	V	D	L	E	K	V	S	S	V	I	V	D	Q	S	L	K	D	Q	V	F	S	R	E	A	G	R	I	C	Y	T	I	V	Q	A	E	A	K	Q	T	N	G	S	V	F	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S															G	G	G	S														T	T								T																S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	L	L	N	R	L	Q	Q	E	F	K	A	R	E	E	T	R	K	R	S	T	Q	E	W	V	C	L	V	S	F	I	C	N	I	F	D	Y	L	K	V	N	N	X	P	X	V	A	L	V	H	P	V	Y	D	C	L	F	R	L	A	Q	S	D	A	L	K	N	E	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T																										S		B	T	T	B			G	G	G												T	S					T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	D	C	L	V	L	Q	L	H	R	I	G	D	Q	L	E	K	X	N	V	Q	L	X	D	E	L	F	N	L	L	R	D	G	F	L	L	Q	E	D	L	S	S	X	G	R	L	L	L	L	E	I	L	E	F	R	A	G	G	W	K	L	S	D	T	A	Q	K	Y	Y	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																				T		S																			T	T	S