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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2i1aC_

Fold library idPDB HeaderMoleculeTitle
c2i1aC_PDB header: protein turnoverChain: C: PDB Molecule: dna damage-inducible protein ddi1;PDBTitle: a retroviral protease-like domain in the eukaryotic protein2 ddi1


Added to library: Tue Mar 16 14:36:46 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence TQVPMLYINIEINNYPVKAFVDTGAQTTIMSTRLAKKTGLSRMIDIGRIHQAQVKIETQYIPCSFTVLDT
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Known secondary structure (DSSP)





TTTT
SS
TT
GGG



TTS
 .........80.........90.........100.........110..
Sequence DIDVLIGLDMLKRHLACVDLKENVLRIAEVETSFLSEAEIPK
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Known secondary structure (DSSP) SSSTT
TTTTTT


TTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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