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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2hzkB_

Fold library idPDB HeaderMoleculeTitle
c2hzkB_PDB header: ligand binding, transport proteinChain: B: PDB Molecule: trap-t family sorbitol/mannitol transporter,PDBTitle: crystal structures of a sodium-alpha-keto acid binding2 subunit from a trap transporter in its open form


Added to library: Tue Mar 16 14:08:49 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PKVTWRLASSFPKSLDTIFGGAEVLSKXLSEATDGNFQIQVFSAGELVPGLQAADAVTEGTVECCHTVGY
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Known secondary structure (DSSP)

SS
TTSTTTT

TTSSS
GGGTTSSS
GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence YYWGKDPTFALAAAVPFSLSARGINAWHYHGGGIDLYNEFLSQHNIVAFPGGNTGVQXGGWFRREINTVA
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Known secondary structure (DSSP) GGTTT
TTT

TT


SSGGGT

SB

SS


SSG
 .........150.........160.........170.........180.........190.........200.........210
Sequence DXQGLKXRVGGFAGKVXERLGVVPQQIAGGDIYPALEKGTIDATEWVGPYDDEKLGFFKVAPYYYYPGWW
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Known secondary structure (DSSP) GGTT


TTT



GGGTS
S



TTTGGGT


BTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence EGGPTVHFXFNKSAYEGLTPTYQSLLRTACHAADANXLQLYDWKNPTAIKSLVAQGTQLRPFSPEILQAC
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Known secondary structure (DSSP)
SS
S
TT


 .........290.........300.........310.........320.........330......
Sequence FEAANEVYAEXEASNPAFKKIWDSIKAFRSEHYTWAQIAEYNYDTFXXVQQNAGKL
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Known secondary structure (DSSP)
TTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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