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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2hxyC_

Fold library idPDB HeaderMoleculeTitle
c2hxyC_PDB header: hydrolaseChain: C: PDB Molecule: probable atp-dependent rna helicase ddx48;PDBTitle: crystal structure of human apo-eif4aiii


Added to library: Tue Mar 16 12:26:52 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRET
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Known secondary structure (DSSP)

SGGGT

T

S

T



SSS
TTS

TTS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence QALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLR
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Known secondary structure (DSSP)

S
SGGG




SSS
S
TT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence TRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELT
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Known secondary structure (DSSP)
TT

TTTT
TTS
SS
S


TTTTS
SS

SS



B
 .........220.........230.........240.........250.........260.........270.........280
Sequence LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERE
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Known secondary structure (DSSP)
TT




STTTS

S
TT




TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIR
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Known secondary structure (DSSP) TS
S
S

SSSS
S


SSS

SSTTT
B
SSS






GGG
 .........360.........370......
Sequence ILRDIEQYYSTQIDEMPMNVADLILE
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Known secondary structure (DSSP) T




S
GGGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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