Fold library entry viewer: c2hg4A_

Added to library: Tue Mar 16 12:44:49 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	E	K	L	R	R	Y	L	K	R	T	V	T	E	L	D	S	V	T	A	R	L	R	E	V	E	H	R	A	G	E	P	I	A	I	V	G	X	A	C	R	F	P	G	D	V	D	S	P	E	S	F	W	E	F	V	S	G	G	G	D	A	I	A	E	A	P	A	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																										B	T	T	T	B		S										T	T									G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	W	E	P	D	P	D	A	R	L	G	G	X	L	A	A	A	G	D	F	D	A	G	F	F	G	I	S	P	R	E	A	L	A	X	D	P	Q	Q	R	I	X	L	E	I	S	W	E	A	L	E	R	A	G	H	D	P	V	S	L	R	G	S	A	T	G	V	F	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S					B			T	T	T	T				T	G	G	G	T									S																		T	T			G	G	G	G	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	G	T	V	D	Y	G	P	R	P	D	E	A	P	D	E	V	L	G	Y	V	G	T	G	T	A	S	S	V	A	S	G	R	V	A	Y	C	L	G	L	E	G	P	A	X	T	V	D	T	A	C	S	S	G	L	T	A	L	H	L	A	X	E	S	L	R	R	D	E	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S			T	T	S	S		G	G	G	G	G	G																			T			S								G	G	G															T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	L	A	L	A	G	G	V	T	V	X	S	S	P	G	A	F	T	E	F	R	S	Q	G	G	L	A	A	D	G	R	C	K	P	F	S	K	A	A	D	G	F	G	L	A	E	G	A	G	V	L	V	L	Q	R	L	S	A	A	R	R	E	G	R	P	V	L	A	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												S	T							T	T	S	S		B		T	T	S				T	T	B	T	T				B		B	B																	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	G	S	A	V	N	Q	D	G	A	S	N	G	L	T	A	P	S	G	P	A	Q	Q	R	V	I	R	R	A	L	E	N	A	G	V	R	A	G	D	V	D	Y	V	E	A	H	G	T	G	T	R	L	G	D	P	I	E	V	H	A	L	L	S	T	Y	G	A	E	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S		S	S	S	S																			T			G	G	G												T	T											T	T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	D	D	P	L	W	I	G	S	V	K	S	N	I	G	H	T	Q	A	A	A	G	V	A	G	V	X	K	A	V	L	A	L	R	H	G	E	X	P	R	T	L	H	F	D	E	P	S	P	Q	I	E	W	A	V	S	V	V	S	Q	A	R	S	W	P	A	G	E	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S							T						B		G	G	G	T	T														T						T	T			S	B		T	T	S									S								S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	R	A	G	V	S	S	F	G	I	S	G	T	N	A	H	V	I	V	E	E	A	P	E	A	D	G	P	V	P	L	V	L	S	G	R	D	E	Q	A	X	R	A	Q	A	G	R	L	A	D	H	L	A	R	E	P	R	N	S	L	R	D	T	G	F	T	L	A	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S																								S	S																			T	T	S												S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	S	A	W	E	H	R	A	V	V	V	G	D	R	D	E	A	L	A	G	L	R	A	V	A	D	G	R	I	A	D	R	T	A	T	G	Q	A	R	T	R	R	G	V	A	X	V	F	P	G	Q	G	A	Q	W	Q	G	X	A	R	D	L	L	R	E	S	Q	V	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				S								S														T				T	T																			T	T	S			S	S	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	S	I	R	D	C	E	R	A	L	A	P	H	V	D	W	S	L	T	D	L	L	S	G	A	R	P	L	D	R	V	D	V	V	Q	P	A	L	F	A	V	X	V	S	L	A	A	L	W	R	S	H	G	V	E	P	A	A	V	V	G	H	S	Q	G	E	I	A	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G		S	S								T	T					S																						T	T				S						T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	H	V	A	G	A	L	T	L	E	D	A	A	K	L	V	A	V	R	S	R	V	L	R	R	L	G	G	Q	G	G	X	A	S	F	G	L	G	T	E	Q	A	A	E	R	I	G	R	F	A	G	A	L	S	I	A	S	V	N	G	P	R	S	V	V	V	A	G	E	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S																G	G	G	G	T	T	S							S	S										G	G	G	T	T	S									T	T								T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	P	L	D	E	L	I	A	E	C	E	A	E	A	H	K	A	R	R	I	P	V	D	Y	A	S	H	S	P	Q	V	E	S	L	R	E	E	L	L	T	E	L	A	G	I	S	P	V	S	A	D	V	A	L	Y	S	T	T	T	G	Q	P	I	D	T	A	T	X	D	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T							S		S				S	S	G	G	G	G	G	G								S	T	T							S	S					T	T	T	S	S				G	G	G		S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	Y	W	Y	A	N	L	R	E	Q	V	R	F	Q	D	A	T	R	Q	L	A	E	A	G	F	D	A	F	V	E	V	S	P	H	P	V	L	T	V	G	I	E	A	T	L	D	S	A	L	P	A	D	A	G	A	C	V	V	G	T	L	R	R	D	R	G	G	L	A	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S														T	T								S	S	S		S	S												S		T	T	S									B	T	T	B		S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
Sequence	H	T	A	L	G	E	A	Y	A	Q	G	V	E	V	D	W	S	P	A	F	A	D	A	R	P	V	E	L	P	V	Y	P	F	Q	R	Q	R	Y	W	L	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T						G	G	G		S	S

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PDB structure

FASTA sequence

Hidden Markov model

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