PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2hf9A_

Fold library id	PDB Header	Molecule	Title
c2hf9A_	PDB header: hydrolase, metal binding protein	Chain: A: PDB Molecule: probable hydrogenase nickel incorporation	PDBTitle: crystal structure of hypb from methanocaldococcus2 jannaschii in the triphosphate form

Links to external resources
Added to library: Tue Mar 16 12:39:12 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K D I L K A N K R L A D K N R K L L N K H G V V A F D F M G A I G S G K T L L I E K L I D N L K D K Y K I A C I A G D V I A K F D A E R M E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T S S T T T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K H G A K V V P L N T G K E C H L D A H L V G H A L E D L N L D E I D L L F I E N V G N L I C P A D F D L G T H K R I V V I S T T E G D D T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T
S S
T T S
G G G
S
S
S S G G G G
S
S G G G
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I E K H P G I M K T A D L I V I N K I D L A D A V G A D I K K M E N D A K R I N P D A E V V L L S L K T M E G F D K V L E F I E K S V K E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T
S
G G G T
T T S
T T T
T T

.

Sequence K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	D	I	L	K	A	N	K	R	L	A	D	K	N	R	K	L	L	N	K	H	G	V	V	A	F	D	F	M	G	A	I	G	S	G	K	T	L	L	I	E	K	L	I	D	N	L	K	D	K	Y	K	I	A	C	I	A	G	D	V	I	A	K	F	D	A	E	R	M	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T									S	T	T	S	S													T	T	T										T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	H	G	A	K	V	V	P	L	N	T	G	K	E	C	H	L	D	A	H	L	V	G	H	A	L	E	D	L	N	L	D	E	I	D	L	L	F	I	E	N	V	G	N	L	I	C	P	A	D	F	D	L	G	T	H	K	R	I	V	V	I	S	T	T	E	G	D	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T									T	T		S	S											T	T	S		G	G	G		S								S		S	S	G	G	G	G				S		S								G	G	G		T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	E	K	H	P	G	I	M	K	T	A	D	L	I	V	I	N	K	I	D	L	A	D	A	V	G	A	D	I	K	K	M	E	N	D	A	K	R	I	N	P	D	A	E	V	V	L	L	S	L	K	T	M	E	G	F	D	K	V	L	E	F	I	E	K	S	V	K	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T						T	T		S							G	G	G					T															T	T	S							T	T	T		T	T
	.
Sequence	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)