PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2h92C_

Fold library id	PDB Header	Molecule	Title
c2h92C_	PDB header: transferase	Chain: C: PDB Molecule: cytidylate kinase;	PDBTitle: crystal structure of staphylococcus aureus cytidine2 monophosphate kinase in complex with cytidine-5'-3 monophosphate

Links to external resources
Added to library: Tue Mar 16 14:40:20 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A I N I A L D G P A A A G K S T I A K R V A S E L S M I Y V D T G A M Y R A L T Y K Y L K L N K T E D F A K L V D Q T T L D L T Y K A D K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S T T
T T S
S
T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q C V I L D N E D V T D F L R N N D V T Q H V S Y V A S K E P V R S F A V K K Q K E L A A E K G I V M D G R D I G T V V L P D A D L K V Y M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G S S S S T S T T
S S
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I A S V E E R A E R R Y K D N Q L R G I E S N F E D L K R D I E A R D Q Y D M N R E I S P L R K A D D A V T L D T T G K S I E E V T D E I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S
S
T T
T T

. . . . . .

Sequence A M V S Q I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	I	N	I	A	L	D	G	P	A	A	A	G	K	S	T	I	A	K	R	V	A	S	E	L	S	M	I	Y	V	D	T	G	A	M	Y	R	A	L	T	Y	K	Y	L	K	L	N	K	T	E	D	F	A	K	L	V	D	Q	T	T	L	D	L	T	Y	K	A	D	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	S												T	T																				T	T	S		S								T									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	C	V	I	L	D	N	E	D	V	T	D	F	L	R	N	N	D	V	T	Q	H	V	S	Y	V	A	S	K	E	P	V	R	S	F	A	V	K	K	Q	K	E	L	A	A	E	K	G	I	V	M	D	G	R	D	I	G	T	V	V	L	P	D	A	D	L	K	V	Y	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T				G	G	G	S	S	S	S											T	S																T	T								S	S							T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	A	S	V	E	E	R	A	E	R	R	Y	K	D	N	Q	L	R	G	I	E	S	N	F	E	D	L	K	R	D	I	E	A	R	D	Q	Y	D	M	N	R	E	I	S	P	L	R	K	A	D	D	A	V	T	L	D	T	T	G	K	S	I	E	E	V	T	D	E	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T																							S	S	S		S				T	T							T	T
	.	.	.	.	.	.
Sequence	A	M	V	S	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T