Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2gyaA_

Fold library idPDB HeaderMoleculeTitle
c2gyaA_PDB header: ribosomeChain: A: PDB Molecule: 50s ribosomal protein l2;PDBTitle: structure of the 50s subunit of a pre-translocational e.2 coli ribosome obtained by fitting atomic models for rna and3 protein components into cryo-em map emd-1056


Added to library: Tue Mar 16 13:28:55 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KSGGRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPK
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)

TTTSSSSS

TTTS


S










S







SS
SS

TTS





S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRS
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) S

SS




STT


STT



GGGS
SS


B


SSSSS

SS

SSS




S


SS
B


TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPW
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP) T



B
SS


B
S

S



TTS


SGGGS



STTS
TTT
SS

TTTT





TT
 .........220.......
Sequence GVQTKGKKTRSNKRTDK
Predicted secondary structure














SS confidence
















Known secondary structure (DSSP)

TTT

SS
S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D