PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2ggsB_

Fold library id	PDB Header	Molecule	Title
c2ggsB_	PDB header: oxidoreductase	Chain: B: PDB Molecule: 273aa long hypothetical dtdp-4-dehydrorhamnose	PDBTitle: crystal structure of hypothetical dtdp-4-dehydrorhamnose2 reductase from sulfolobus tokodaii

Links to external resources
Added to library: Tue Mar 16 12:27:58 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M R T L I T G A S G Q L G I E L S R L L S E R H E V I K V Y N S S E I Q G G Y K L D L T D F P R L E D F I I K K R P D V I I N A A A M T D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S T T T S
S S S
S S B
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D K C E I E K E K A Y K I N A E A V R H I V R A G K V I D S Y I V H I S T D Y V F D G E K G N Y K E E D I P N P I N Y Y G L S K L L G E T F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
G G G S
S S S
S B
T T S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A L Q D D S L I I R T S G I F R N K G F P I Y V Y K T L K E G K T V F A F K G Y Y S P I S A R K L A S A I L E L L E L R K T G I I H V A G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S S T T T
S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . .

Sequence R I S R F E L A L K I K E K F N L P G E V K E V D E V R G W I A K R P Y D S S L D S S R A R K I L S T D F Y T L D L D G M V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
S
S B
B
S
S S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	R	T	L	I	T	G	A	S	G	Q	L	G	I	E	L	S	R	L	L	S	E	R	H	E	V	I	K	V	Y	N	S	S	E	I	Q	G	G	Y	K	L	D	L	T	D	F	P	R	L	E	D	F	I	I	K	K	R	P	D	V	I	I	N	A	A	A	M	T	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	T	T	S											T	T	T	S							S	S	S			S	S	B					T	T															S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	K	C	E	I	E	K	E	K	A	Y	K	I	N	A	E	A	V	R	H	I	V	R	A	G	K	V	I	D	S	Y	I	V	H	I	S	T	D	Y	V	F	D	G	E	K	G	N	Y	K	E	E	D	I	P	N	P	I	N	Y	Y	G	L	S	K	L	L	G	E	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T													T	T									G	G	G	S		S	S	S		S	B		T	T	S					S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	L	Q	D	D	S	L	I	I	R	T	S	G	I	F	R	N	K	G	F	P	I	Y	V	Y	K	T	L	K	E	G	K	T	V	F	A	F	K	G	Y	Y	S	P	I	S	A	R	K	L	A	S	A	I	L	E	L	L	E	L	R	K	T	G	I	I	H	V	A	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T											S	S	S	S										T	T	T							S																					T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Sequence	R	I	S	R	F	E	L	A	L	K	I	K	E	K	F	N	L	P	G	E	V	K	E	V	D	E	V	R	G	W	I	A	K	R	P	Y	D	S	S	L	D	S	S	R	A	R	K	I	L	S	T	D	F	Y	T	L	D	L	D	G	M	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									S	S		T	T			S				S	B			B											S			S	S			G	G	G