PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2genA_

Fold library id	PDB Header	Molecule	Title
c2genA_	PDB header: transcription	Chain: A: PDB Molecule: probable transcriptional regulator;	PDBTitle: structural genomics, the crystal structure of a probable2 transcriptional regulator from pseudomonas aeruginosa pao1

Links to external resources
Added to library: Tue Mar 16 14:38:36 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R K D E I L Q A A L A C F S E H G V D A T T I E X I R D R S G A S I G S L Y H H F G N K E R I H G E L Y L A G I G Q Y A A L L E A G F A R A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R S A E E T V R L L V T S Y I D W V V A N P D W A R F I L H S R G R V E A G E L G E R L R A D N Q A H F A R I H A A L A G Y R A E G L F R E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T T T T
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . .

Sequence X P D D C F A S V V I G P A H D L A R Q W L A G R T R V A L A D C R E L L A Q V A W D S V R A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
G G G G B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	K	D	E	I	L	Q	A	A	L	A	C	F	S	E	H	G	V	D	A	T	T	I	E	X	I	R	D	R	S	G	A	S	I	G	S	L	Y	H	H	F	G	N	K	E	R	I	H	G	E	L	Y	L	A	G	I	G	Q	Y	A	A	L	L	E	A	G	F	A	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	T																					T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	S	A	E	E	T	V	R	L	L	V	T	S	Y	I	D	W	V	V	A	N	P	D	W	A	R	F	I	L	H	S	R	G	R	V	E	A	G	E	L	G	E	R	L	R	A	D	N	Q	A	H	F	A	R	I	H	A	A	L	A	G	Y	R	A	E	G	L	F	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																																				S	T	T																									T	T		B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Sequence	X	P	D	D	C	F	A	S	V	V	I	G	P	A	H	D	L	A	R	Q	W	L	A	G	R	T	R	V	A	L	A	D	C	R	E	L	L	A	Q	V	A	W	D	S	V	R	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T			S	S		G	G	G	G													B