PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2gauA_

Fold library id	PDB Header	Molecule	Title
c2gauA_	PDB header: transcription	Chain: A: PDB Molecule: transcriptional regulator, crp/fnr family;	PDBTitle: crystal structure of transcriptional regulator, crp/fnr2 family from porphyromonas gingivalis (apc80792),3 structural genomics, mcsg

Links to external resources
Added to library: Tue Mar 16 14:24:49 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L G H L L R D V W S L L N E E E R E L L D K E I Q P F P C K K A S T V F S E G D I P N N L F Y L Y E G K I K I L R R F H I S R I V K P G Q F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S T T
T T
T T
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F G M R P Y F A E E T C S S T A I A V E N S K V L A I P V E A I E A L L K G N T S F C R Y F L K A L A K E L G Y A E R R T V T L T Q K H V R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T S
S S S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G R L A E T L L I L K E N F G F E N D G A T L S I Y L S R E E L A T L S N M T V S N A I R T L S T F V S E R M L A L D G K R I K I I D C D R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T S S B B S
T T S
T T S T T S

. . . . . . . .

Sequence L Q K T A R S G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	G	H	L	L	R	D	V	W	S	L	L	N	E	E	E	R	E	L	L	D	K	E	I	Q	P	F	P	C	K	K	A	S	T	V	F	S	E	G	D	I	P	N	N	L	F	Y	L	Y	E	G	K	I	K	I	L	R	R	F	H	I	S	R	I	V	K	P	G	Q	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S					T	T																				T	T						T	T												S																T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	G	M	R	P	Y	F	A	E	E	T	C	S	S	T	A	I	A	V	E	N	S	K	V	L	A	I	P	V	E	A	I	E	A	L	L	K	G	N	T	S	F	C	R	Y	F	L	K	A	L	A	K	E	L	G	Y	A	E	R	R	T	V	T	L	T	Q	K	H	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S							T	S			S	S					S	S																																															S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	R	L	A	E	T	L	L	I	L	K	E	N	F	G	F	E	N	D	G	A	T	L	S	I	Y	L	S	R	E	E	L	A	T	L	S	N	M	T	V	S	N	A	I	R	T	L	S	T	F	V	S	E	R	M	L	A	L	D	G	K	R	I	K	I	I	D	C	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																B		T	T	S	S	B	B	S												T	T	S															T	T	S					T	T					S
	.	.	.	.	.	.	.	.
Sequence	L	Q	K	T	A	R	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)