PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2fv2A_

Fold library id	PDB Header	Molecule	Title
c2fv2A_	PDB header: transcription	Chain: A: PDB Molecule: rcd1 required for cell differentiation1 homolog;	PDBTitle: crystal structure analysis of human rcd-1 conserved region

Links to external resources
Added to library: Tue Mar 16 13:17:27 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R E K I Y Q W I N E L S S P E T R E N A L L E L S K K R E S V P D L A P M L W H S F G T I A A L L Q E I V N I Y P S I N P P T L T A H Q S N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S T T T T T T
T T S T T T G G G B T T B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R V C N A L A L L Q C V A S H P E T R S A F L A A H I P L F L Y P F L H T V S K T R P F E Y L R L T S L G V I G A L V K T D E Q E V I N F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T G G G G T
S G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L T T E I I P L C L R I M E S G S E L S K T V A T F I L Q K I L L D D T G L A Y I C Q T Y E R F S H V A M I L G K M V L Q L S K E P S A R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S T S S T T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . .

Sequence L K H V V R C Y L R L S D N P R A R E A L R Q C L P D Q L K D T T F A Q V L K D D T T T K R W L A Q L V K N L Q E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
G G G T S S T T T S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	E	K	I	Y	Q	W	I	N	E	L	S	S	P	E	T	R	E	N	A	L	L	E	L	S	K	K	R	E	S	V	P	D	L	A	P	M	L	W	H	S	F	G	T	I	A	A	L	L	Q	E	I	V	N	I	Y	P	S	I	N	P	P	T	L	T	A	H	Q	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	S	S	T	T	T												T	T	T		T	T								S	T	T												T	G	G	G	B	T	T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	V	C	N	A	L	A	L	L	Q	C	V	A	S	H	P	E	T	R	S	A	F	L	A	A	H	I	P	L	F	L	Y	P	F	L	H	T	V	S	K	T	R	P	F	E	Y	L	R	L	T	S	L	G	V	I	G	A	L	V	K	T	D	E	Q	E	V	I	N	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T							T	T	G	G	G	G	T										S																		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	T	T	E	I	I	P	L	C	L	R	I	M	E	S	G	S	E	L	S	K	T	V	A	T	F	I	L	Q	K	I	L	L	D	D	T	G	L	A	Y	I	C	Q	T	Y	E	R	F	S	H	V	A	M	I	L	G	K	M	V	L	Q	L	S	K	E	P	S	A	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T												S																		S								T	S	S																		T	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Sequence	L	K	H	V	V	R	C	Y	L	R	L	S	D	N	P	R	A	R	E	A	L	R	Q	C	L	P	D	Q	L	K	D	T	T	F	A	Q	V	L	K	D	D	T	T	T	K	R	W	L	A	Q	L	V	K	N	L	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S											S		G	G	G	T	S	S	T	T					T	S															S