Fold library entry viewer: c2fuqA_

Added to library: Tue Mar 16 13:24:14 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	K	A	D	V	V	W	K	D	V	D	G	V	S	M	P	I	P	P	K	T	H	P	R	L	Y	L	R	E	Q	Q	V	P	D	L	K	N	R	M	N	D	P	K	L	K	K	V	W	A	D	M	I	K	M	Q	E	D	W	K	P	A	D	I	P	E	V	K	D	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S						T	T								S	S	S			S	S			G	G	G	G	G	G						S															T	S				T	T	T			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	Y	F	N	Q	K	G	L	T	V	R	V	E	L	M	A	L	N	Y	L	M	T	K	D	P	K	V	G	R	E	A	I	T	S	I	I	D	T	L	E	T	A	T	F	K	P	A	G	D	I	S	R	G	I	G	L	F	M	V	T	G	A	I	V	Y	D	W	C	Y	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			S																																							S		T	T																			T	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	L	K	P	E	E	K	T	R	F	V	K	A	F	V	R	L	A	K	M	L	E	C	G	Y	P	P	V	K	D	K	S	I	V	G	H	A	S	E	W	M	I	M	R	D	L	L	S	V	G	I	A	I	Y	D	E	F	P	E	M	Y	N	L	A	A	G	R	F	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G																		T	T	S	T	T		S	S			S	S		S	S	S	S	G	G	G	S					T										T	T	T		T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	H	L	V	A	R	N	W	F	Y	P	S	H	N	Y	H	Q	G	M	S	Y	L	N	V	R	F	T	N	D	L	F	A	L	W	I	L	D	R	M	G	A	G	N	V	F	N	P	G	Q	Q	F	I	L	Y	D	A	I	Y	K	R	R	P	D	G	Q	I	L	A	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									G	G	G				S	S																							T	T				S		G	G	G	G	G	T	T						T	B		T	T	S		B				S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	V	D	Y	S	R	K	K	P	K	Y	Y	T	M	P	A	L	L	A	G	S	Y	Y	K	D	E	Y	L	N	Y	E	F	L	K	D	P	N	V	E	P	H	C	K	L	F	E	F	L	W	R	D	T	Q	L	G	S	R	K	P	D	D	L	P	L	S	R	Y	S	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					S	S	S																T											S					G	G	G										S	S						G	G	G	S		S					T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	F	G	W	M	I	A	R	T	G	W	G	P	E	S	V	I	A	E	M	K	V	N	E	Y	S	F	L	N	H	Q	H	Q	D	A	G	A	F	Q	I	Y	Y	K	G	P	L	A	I	D	A	G	S	Y	T	G	S	S	G	G	Y	N	S	P	H	N	K	N	F	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							S		S	S	T	T										S	B				T	T			S		T	T							S	S									S	S	B	T	T	B	S	T	T	S						T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	T	I	A	H	N	S	L	L	I	Y	D	P	K	E	T	F	S	S	S	G	Y	G	G	S	D	H	T	D	F	A	A	N	D	G	G	Q	R	L	P	G	K	G	W	I	A	P	R	D	L	K	E	M	L	A	G	D	F	R	T	G	K	I	L	A	Q	G	F	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	G	G	G	S	S	S						T	T				B		T	T	S	S	S	S	S			S	B					S						T	T	T	S				S	S							T	T		B											S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	N	Q	T	P	D	Y	T	Y	L	K	G	D	I	T	A	A	Y	S	A	K	V	K	E	V	K	R	S	F	L	F	L	N	L	K	D	A	K	V	P	A	A	M	I	V	F	D	K	V	V	A	S	N	P	D	F	K	K	F	W	L	L	H	S	I	E	Q	P	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S		S									G	G	G	S		T	T																S	S	S													S	S	T	T	S									S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	G	N	Q	I	T	I	K	R	T	K	N	G	D	S	G	M	L	V	N	T	A	L	L	P	D	A	A	N	S	N	I	T	S	I	G	G	K	G	K	D	F	W	V	F	G	T	N	Y	T	N	D	P	K	P	G	T	D	E	A	L	E	R	G	E	W	R	V	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T								S	T	T												S		G	G	G								S	T	T	T	T	T			T	T									T	T	S		T	T		T	T		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	P	K	K	A	A	A	E	D	Y	Y	L	N	V	I	Q	I	A	D	N	T	Q	Q	K	L	H	E	V	K	R	I	D	G	D	K	V	V	G	V	Q	L	A	D	R	I	V	T	F	S	K	T	S	E	T	V	D	R	P	F	G	F	S	V	V	G	K	G	T	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S			S													T	T													B	S							T	T							T	T	S	S		B		S								S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
Sequence	F	V	M	T	D	L	L	P	G	T	W	Q	V	L	K	D	G	K	I	L	Y	P	A	L	S	A	K	G	D	D	G	A	L	Y	F	E	G	T	E	G	T	Y	R	F	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	B		S								T	T											T	T	T									S

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PDB structure

FASTA sequence

Hidden Markov model

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