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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2ftcH_ | PDB header: ribosome | Chain: H: PDB Molecule: 39s ribosomal protein l13, mitochondrial; | PDBTitle: structural model for the large subunit of the mammalian2 mitochondrial ribosome |
Added to library: Tue Mar 16 14:06:01 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | M | S | S | F | S | R | A | P | Q | Q | W | A | T | F | A | R | I | W | Y | L | L | D | G | K | M | Q | P | P | G | K | L | A | A | M | A | S | I | R | L | Q | G | L | H | K | P | V | Y | H | A | L | S | D | C | G | D | H | V | V | I | M | N | T | R | H | I | A | F | S | G | N |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | B | T | T | B | B | B | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | T | T | T | T | S | S | S | S | S | S | T | T | S | ![]() | ![]() | ![]() | T | T | G | G |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | K | W | E | Q | K | V | Y | S | S | H | T | G | Y | P | G | G | F | R | Q | V | T | A | A | Q | L | H | L | R | D | P | V | A | I | V | K | L | A | I | Y | G | M | L | P | K | N | L | H | R | R | T | M | M | E | R | L | H | L | F | P | D | E | Y | I | P | E | D | I | L | K | N |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | S | S | S | S | S | S | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | T | T | S | S | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | T | S | S |   | . | . | . | . | . | . | . | . | ||||||||||||
Sequence | L | V | E | E | L | P | Q | P | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B |
Download: | PDB structure | FASTA sequence |
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