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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2ftcC_ | PDB header: ribosome | Chain: C: PDB Molecule: mitochondrial 39s ribosomal protein l3; | PDBTitle: structural model for the large subunit of the mammalian2 mitochondrial ribosome |
Added to library: Tue Mar 16 12:34:46 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | R | V | G | L | I | A | L | K | L | G | M | M | P | L | W | T | K | D | G | Q | K | H | V | V | T | L | L | Q | V | Q | D | C | H | V | L | K | Y | T | S | K | E | N | C | N | G | K | M | A | T | L | S | V | G | G | K | T | V | S | R | F | R | K | A | T | S | I | L | E | F | Y |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | S | T | T | T | T | S | S | ![]() | ![]() | ![]() | S | S | S | S | S | S | S | S | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | R | E | L | G | L | P | P | K | Q | T | V | K | I | F | N | I | T | D | N | A | A | I | K | P | G | T | P | L | Y | A | A | H | F | R | P | G | Q | Y | V | D | V | T | A | K | T | I | G | K | G | F | Q | G | V | M | K | R | W | G | F | K | G | Q | P | A | T | H | G | Q | T | K |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | ![]() | ![]() | ![]() | S | S | S | T | T | T | S | S | S | S | S | S | S | T | T | S | S | T | T | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | T | H | R | R | P | G | A | V | A | T | G | D | I | G | R | V | W | P | G | T | K | M | P | G | K | M | G | N | I | Y | R | T | E | Y | G | L | K | V | W | R | I | N | T | K | H | N | I | I | Y | V | N | G | S | V | P | G | H | K | N | C | L | V | K | V | K | D | S | K | L | P |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | S | S | S | T | T | S | S | S |   | . | |||||||||||||||||||||||||||||||||||
Sequence | A | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) |
Download: | PDB structure | FASTA sequence |
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