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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2fsgB_

Fold library idPDB HeaderMoleculeTitle
c2fsgB_PDB header: protein transportChain: B: PDB Molecule: preprotein translocase seca subunit;PDBTitle: complex seca:atp from escherichia coli


Added to library: Wed Jan 9 20:42:25 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RNDRTLRRXRKVVNIINAXEPEXEKLSDEELKGKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGXR
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Known secondary structure (DSSP)
S
TT

GGGGTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence HFDVQLLGGXVLNERCIAEXRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGL
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Known secondary structure (DSSP)

TTSS

TTS
TTTTTSS

SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TVGINLPGXPAPAKREAYAADITYGTNNEYGFDYLRDNXAFSPEERVQRKLHYALVDEVDSILIDEARTP
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Known secondary structure (DSSP)


TT

SSTT
SSGGG






S
TTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LIISGPAEDSSEXYKRVNKIIPHLIRVLIEELLVKEGIXDEGESLYSPANIXLXHHVTAALRAHQNENQT
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Known secondary structure (DSSP) S




TSSS



S
SSSSTTT

TTSTTS





 .........290.........300.........310.........320.........330.........340.........350
Sequence LASITFQNYFRLYEKLAGXTGTADTEAFEFSSIYKLDTVVVPTNRPXIRKDLPDLVYXTEAEKIQAIIED
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Known secondary structure (DSSP) TTSS
S








SS






SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNXAGRGT
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Known secondary structure (DSSP) TT

SST




TT
TTTSTT
S

SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence DIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDA
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Known secondary structure (DSSP)


TT

SSTTTTT
SS

TTSSS

S
TTSSGGG

 .........500.........510.........520.........530.........540.........550.........560
Sequence GSSRFYLSXEDALXRIFASDRVSGXXRKLGXKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDV
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Known secondary structure (DSSP) TTSGGGGGGS
TTGGGG


TT




 .........570.........580.........590.........600.........610.........620.........630
Sequence ANDQRRAIYSQRNELLDVSDVSETINSIREDVFKATIDAYIPPQSLEEXWDIPGLQERLKNDFDLDLPIA
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Known secondary structure (DSSP)
S

TTS
TT

GGG


TT




TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence EWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEXXRHFEKGVXLQTLDSLWKEHLAAXDYLRQGIHL
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Known secondary structure (DSSP) TSTTS

TTTS
 .........710.........720.........730.........740...
Sequence RGYAQKDPKQEYKRESFSXFAAXLESLKYEVISTLSKVQVRXP
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Known secondary structure (DSSP) SS
SSS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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