Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2forB_

Fold library idPDB HeaderMoleculeTitle
c2forB_PDB header: transferaseChain: B: PDB Molecule: geranyltranstransferase;PDBTitle: crystal structure of the shigella flexneri farnesyl2 pyrophosphate synthase complex with an isopentenyl3 pyrophosphate


Added to library: Tue Mar 16 12:16:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPA
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)

TT
S
TTSSS


TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence AAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRIS
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) STTTT

STT

S

TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence MISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDK
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) STTTTTTS


TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YAESIGLAFQVQDDILDVVKSTYPALLGLEQARKKARDLIDDARQALKQLAEQSLDTSALEALADYIIQR
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP)




TTT



 .
Sequence N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D