Fold library entry viewer: c2fnqB_

Added to library: Tue Mar 16 12:26:55 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	I	Y	N	V	E	V	E	T	G	D	R	E	H	A	G	T	D	A	T	I	T	I	R	I	T	G	A	K	G	R	T	D	Y	L	K	L	D	K	W	F	H	N	D	F	E	A	G	S	K	E	Q	Y	T	V	Q	G	F	D	V	G	D	I	Q	L	I	E	L	H	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	T	T					S							B		S	S		B									T	T	S			S		T	T										S			S	S			B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	G	G	G	Y	W	D	P	D	W	F	V	N	R	V	I	I	I	S	S	T	Q	D	R	V	Y	S	F	P	C	F	R	W	V	I	K	D	M	V	L	F	P	G	E	A	T	L	P	F	N	E	V	P	A	I	V	S	E	Q	R	Q	K	E	L	E	Q	R	K	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																		T	T		S	S											S	S							S	S				T	T	S				G	G	G	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	Q	W	D	Y	V	S	D	D	M	P	G	N	I	K	A	K	T	H	D	D	L	P	R	D	V	Q	F	T	D	E	K	S	R	S	Y	Q	E	S	R	K	A	A	L	V	N	L	G	I	G	S	L	F	T	M	F	E	N	W	D	S	Y	D	D	Y	H	I	L	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					S		T	T	S							S	S	G	G	G	S		G	G	G	S													T	T					T	T	T						T						S		G	G	G	G	G	G	G	G	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	W	I	L	G	G	T	P	N	M	A	D	R	W	H	E	D	R	W	F	G	Y	Q	F	L	N	G	A	N	P	V	I	L	T	R	C	D	A	L	P	S	N	F	P	V	T	N	E	H	V	N	A	S	L	D	R	N	L	D	E	E	I	K	D	G	H	I	Y	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			T	T		S		G	G	G	G	T	T	T	S											S	S			S	S					S	S			T	T									G	G	G									T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	F	K	V	L	V	G	A	K	S	Y	A	D	I	R	Y	C	A	A	P	L	A	L	F	Y	V	N	K	L	G	H	L	M	P	I	A	I	Q	I	N	Q	E	P	G	P	E	N	P	I	W	T	P	H	E	E	N	E	H	D	W	M	M	A	K	F	W	L	G	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T												B												T	T	S									S	S	S	S		S	S	S	S					T	T		S	S	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	S	N	F	H	Q	L	N	T	H	L	L	R	T	H	L	T	T	E	S	F	A	L	S	T	W	R	N	L	A	S	A	H	P	V	F	K	L	L	Q	P	H	I	Y	G	V	L	A	I	D	T	I	G	R	K	E	L	I	G	S	G	G	I	V	D	Q	S	L	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													S		T	T	S											T	T												T	T	S	T	T		T	T	T	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	G	G	G	H	V	T	F	M	E	K	C	F	K	E	V	N	L	Q	D	Y	H	L	P	N	A	L	K	K	R	G	V	D	D	P	S	K	L	P	G	F	Y	Y	R	D	D	G	L	A	L	W	E	A	I	E	T	F	I	G	E	I	I	A	I	F	Y	K	N	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T												T			G	G	G	G									T	T				T	T	T	S																														S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	V	K	R	D	N	E	I	Q	S	W	I	Y	D	V	H	K	N	G	W	R	V	N	P	G	H	Q	D	H	G	V	P	A	S	F	E	S	R	E	Q	L	K	E	V	L	T	S	L	V	F	T	F	S	C	Q	H	A	A	V	N	F	S	Q	K	D	H	Y	G	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	S				S	S	S							S	S																			T								T	T					T	T	S	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	N	A	P	A	V	L	R	H	P	P	P	K	K	K	G	E	A	T	L	Q	S	I	L	S	T	L	P	S	K	S	Q	A	A	K	A	I	A	T	V	Y	I	L	T	K	F	S	E	D	E	R	Y	L	G	N	Y	S	A	T	A	W	E	D	K	D	A	L	D	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S		S		B		S				S	S	S	S				T	T	G	G	G	S	S	S																	T				T	T			B	S	S			T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
Sequence	N	R	F	Q	D	K	L	E	D	I	S	K	K	I	K	Q	R	N	E	N	L	E	V	P	Y	I	Y	L	L	P	E	R	I	P	N	G	T	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	S	S	S				T	T		G	G	G	S	B	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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