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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2fmdA_

Fold library idPDB HeaderMoleculeTitle
c2fmdA_PDB header: sugar binding proteinChain: A: PDB Molecule: lectin;PDBTitle: structural basis of carbohydrate recognition by bowringia2 milbraedii seed agglutinin


Added to library: Tue Mar 16 13:58:14 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ANSVCFTFTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQSSSLVASFE
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Known secondary structure (DSSP)

SS

TT
TTT

TTS

S
B
TTS
B
SS
SS
B



TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TTFTFSISQGSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNDNGVVSVEFDTYPNTDIGDPNYRHI
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Known secondary structure (DSSP)

BSSSS



TT



TT

GGGTTT
S






S

GGGT

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GIDVNSIRSKAASKWDWQNGKTATAHISYNSASKRLSVVSSYPNSSPVVVSFDVELNNVPWVRVGFSATT
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Known secondary structure (DSSP) SSSS
S



SS
TTTT
TTS



GGG


B
 .........220.........230
Sequence GQYTQTNNILAWSFRSSLMG
Predicted secondary structure






SS confidence



















Known secondary structure (DSSP)
SS
B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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