Fold library entry viewer: c2fjuB_

Added to library: Tue Mar 16 12:02:32 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	K	V	K	A	Y	L	S	Q	G	E	R	F	I	K	W	D	D	E	T	T	V	A	S	P	V	I	L	R	V	D	P	K	G	Y	Y	L	Y	W	T	Y	Q	S	K	E	M	E	F	L	D	I	T	S	I	R	D	T	R	F	G	K	F	A	K	M	P	K	S	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S	S	S	S											T	T	S								T	T	S							G	G	G							G	G	G	S					S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	R	D	V	F	N	M	D	F	P	D	N	S	F	L	L	K	T	L	T	V	V	S	G	P	D	M	V	D	L	T	F	H	N	F	V	S	Y	K	E	N	V	G	K	A	W	A	E	D	V	L	A	L	V	K	H	P	L	T	A	N	A	S	R	S	T	F	L	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T	S	T	T			G	G	G	T								S	S	S	S	S									S	S	S	S														T						T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	L	V	K	L	K	M	Q	L	N	S	E	G	K	I	P	V	K	N	F	F	Q	M	F	P	A	D	R	K	R	V	E	A	A	L	S	A	C	H	L	P	K	G	K	N	D	A	I	N	P	E	D	F	P	E	P	V	Y	K	S	F	L	M	S	L	C	P	R	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S			T	T	S											S	T	T												T	T				S	S	S					G	G	G	S		T	T										S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	D	E	I	F	T	S	Y	M	T	K	E	H	L	T	K	F	I	N	Q	K	Q	R	D	Q	G	L	I	D	K	Y	E	P	S	G	Q	L	S	P	E	G	M	V	W	F	L	C	G	P	E	N	S	V	L	A	Q	D	K	L	L	L	H	H	D	M	T	Q	P	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										B											T	S														B												S	T	T	S		S	B		G	G	G	G	S	S		S				S		G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	H	Y	F	I	N	S	S	H	N	T	Y	L	T	A	G	Q	F	S	G	L	S	S	A	E	M	Y	R	Q	V	L	L	S	G	C	R	C	V	E	L	D	C	W	K	G	K	P	P	D	E	E	P	I	I	T	H	G	F	T	M	T	T	D	I	F	F	K	E	A	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G					B	B	S	S	T	T	B	S	S		S	S	S	S		B		T									T	T													T	T	T	T							T	T	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	I	A	E	S	A	F	K	T	S	P	Y	P	I	I	L	S	F	E	N	H	V	D	S	P	R	Q	Q	A	K	M	A	E	Y	C	R	T	I	F	G	D	M	L	L	T	E	P	L	E	K	F	P	L	K	P	G	V	P	L	P	S	P	E	D	L	R	G	K	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	S			S																												G	G	G	B			S			T	T	S		S	S	T	T						T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	K	N	K	K	E	E	S	G	N	L	D	E	E	E	I	K	K	M	Q	S	D	E	G	T	A	G	L	E	V	T	A	Y	E	E	M	S	S	L	V	N	Y	I	Q	P	T	K	F	V	S	F	E	F	S	A	Q	K	N	R	S	Y	V	I	S	S	F	T	E	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T	T	T	T	T	T	T	T	T	G	G	G	G											T	T		S	S																T		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	Y	D	L	L	S	K	A	S	V	Q	F	V	D	Y	N	K	R	Q	M	S	R	I	Y	P	K	G	T	R	M	D	S	S	N	Y	M	P	Q	M	F	W	N	A	G	C	Q	M	V	A	L	N	F	Q	T	M	D	L	P	M	Q	Q	N	M	A	V	F	E	F	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S								T	T		T	T												T	T						B		T	T			S										T	T	T	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Q	S	G	Y	L	L	K	H	E	F	M	R	R	P	T	T	L	S	I	T	V	I	S	G	Q	F	L	S	E	R	S	V	R	T	Y	V	E	V	E	L	F	G	L	P	G	D	P	K	R	R	Y	R	T	K	L	S	P	S	T	N	S	I	N	P	V	W	K	E	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G		S						G	G	G	T														S			S	S														T	T	S											S	S	S			S	S		B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.
Sequence	F	V	F	E	K	I	L	M	P	E	L	A	S	L	R	V	A	V	M	E	E	G	N	K	F	L	G	H	R	I	I	P	I	N	A	L	N	S	G	Y	H	H	L	C	L	H	S	E	S	N	M	P	L	T	M	P	A	L	F	I	F	L	E	M	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		G	G	G										T	T	T										G	G	G	B												T	T

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PDB structure

FASTA sequence

Hidden Markov model

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