Fold library entry viewer: c2eepA_

Added to library: Tue Mar 16 12:12:24 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	P	E	Y	V	V	G	L	Q	W	M	G	D	N	Y	V	F	I	E	G	D	D	L	V	F	N	K	T	T	R	F	S	A	A	D	L	N	A	L	M	P	F	P	S	F	R	T	L	D	A	G	R	G	L	V	V	L	F	T	Q	G	G	L	V	G	F	D	M	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	T	T					T	T							T	T																													T	T	T	T							T	T							T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	K	V	T	Y	L	F	D	T	N	E	E	T	A	S	L	D	F	S	P	V	G	D	R	V	A	Y	V	R	N	H	N	L	Y	I	A	R	G	G	K	L	G	E	G	M	S	R	A	I	A	V	T	I	D	G	T	E	T	L	V	Y	G	Q	A	V	H	Q	R	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									T	T			T	T					T	T	S	S							T	T								B		T	T	S								S		S			B	T	T				S	S			G	G	G		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	I	E	K	G	T	F	W	S	P	K	G	S	C	L	A	F	Y	R	M	D	Q	S	M	V	K	P	T	P	I	V	D	Y	H	P	L	E	A	E	S	K	P	L	Y	Y	P	M	A	G	T	P	S	H	H	V	T	V	G	I	Y	H	L	A	T	G	K	T	V	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				S					T	T	S	S										T	T	S										S	S	S										B	T	T	S												T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	T	G	E	P	K	E	K	F	L	T	N	L	S	W	S	P	D	E	N	I	L	Y	V	A	E	V	N	R	A	Q	N	E	C	K	V	N	A	Y	D	A	E	T	G	R	F	V	R	T	L	F	V	E	T	D	K	H	Y	V	E	P	L	H	P	L	T	F	L	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		T	T										T	T	S	S									T	T	S										T	T	T													S	S						S						T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	N	N	Q	F	I	W	Q	S	R	R	D	G	W	N	H	L	Y	L	Y	D	T	T	G	R	L	I	R	Q	V	T	K	G	E	W	E	V	T	N	F	A	G	F	D	P	K	G	T	R	L	Y	F	E	S	T	E	A	S	P	L	E	R	H	F	Y	C	I	D	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S								T	T	S	S								T	T	S							S		S	S	S										T	T	S								S	S	S		T	T		B							T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	G	K	T	K	D	L	T	P	E	S	G	M	H	R	T	Q	L	S	P	D	G	S	A	I	I	D	I	F	Q	S	P	T	V	P	R	K	V	T	V	T	N	I	G	K	G	S	H	T	L	L	E	A	K	N	A	M	P	E	I	R	T	G	T	I	M	A	A	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S			S	S	S								S	S	S	S									S	S		S								T	T	S																							T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	T	P	L	Y	Y	K	L	T	M	P	L	H	F	D	P	A	K	K	Y	P	V	I	V	Y	V	Y	G	G	P	H	A	Q	L	V	T	K	T	W	R	V	G	G	W	D	I	Y	M	A	Q	K	G	Y	A	V	F	T	V	D	S	R	G	S	A	N	R	G	A	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S										T	T			T	T	S												T	T						S	S				T	T								T	T									T	T		S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	Q	V	I	H	R	R	L	G	Q	T	E	M	A	D	Q	M	C	G	V	D	F	L	K	S	Q	S	W	V	D	A	D	R	I	G	V	H	G	W	S	Y	G	G	F	M	T	T	N	L	M	L	T	H	G	D	V	F	K	V	G	V	A	G	G	P	V	I	D	W	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T		T	T																T	S	T	T												T													S	T	T	T								S					G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	Y	E	I	M	Y	G	E	R	Y	F	D	A	P	Q	E	N	P	E	G	Y	D	A	A	N	L	L	K	R	A	G	D	L	K	G	R	L	M	L	I	H	G	A	I	D	P	V	V	V	W	Q	H	S	L	L	F	L	D	A	C	V	K	A	R	T	Y	P	D	Y	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S	B											T	T	T										G	G	G	G	G	G	G			S								T	T		S	S	S		T														T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.
Sequence	V	Y	P	S	H	E	H	N	V	M	G	P	D	R	V	H	L	Y	E	T	I	T	R	Y	F	T	D	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			S	S			T	T

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PDB structure

FASTA sequence

Hidden Markov model

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