Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2e87A_

Fold library idPDB HeaderMoleculeTitle
c2e87A_PDB header: structural genomics, unknown functionChain: A: PDB Molecule: hypothetical protein ph1320;PDBTitle: crystal structure of hypothetical gtp-binding protein2 ph1320 from pyrococcus horikoshii ot3, in complex with gdp


Added to library: Tue Mar 16 13:20:57 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XRNPFERXPTVLTADELIDKAFRRAEKAASSFKPRGNKVKKARLREELRVRTVSNVVRDNLRKVLERTPG
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)


TTTT





T



SSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence LSTLPKFYQELVDVLVDRDTFHKAXAGIDWAIRIIRELEERYVERIRYSNDPNEIAELRRQFYGRVASVL
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) GGGS

T


 .........150.........160.........170.........180.........190.........200.........210
Sequence RDIDDRLRYLNKAREVLKDLPVVDLEIPTVVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFE
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TGGGS



SSS

STTSS
SS



TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DGYFRYQIIDTPGLLDRPISERNEIEKQAILALRYLGNLIIYIFDPSEHCGFPLEEQIHLFEEVHGEFKD
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TT
TTTSSS
STTS
GGGGT
S
TT
TTSS
TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPFLVVINKIDVADEENIKRLEKFVKEKGLNPIKISALKGTGIDLVKEEIIKTLRPLAEKVAREKIEREL
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) S


TTT

TT



BTTTTBT
 ......
Sequence RRYRSY
Predicted secondary structure

SS confidence





Known secondary structure (DSSP) TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D