PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2e18B_

Fold library id	PDB Header	Molecule	Title
c2e18B_	PDB header: ligase	Chain: B: PDB Molecule: nh(3)-dependent nad(+) synthetase;	PDBTitle: crystal structure of project ph0182 from pyrococcus2 horikoshii ot3

Links to external resources
Added to library: Tue Mar 16 13:02:44 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M R I L D Y D K V I E R I L E F I R E K G N N G V V I G I S G G V D S A T V A Y L A T K A L G K E K V L G L I M P Y F E N K D V E D A K L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
G G G
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A E K L G I G Y K V I N I K P I V D S F V E N L E L N L D R K G L G N I M S R T R M I M L Y A H A N S L G R I V L G T S N R S E F L T G Y F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T
T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T K W G D G A S D Y A P I I N L Y K T E V W E I A K R I G V P E R I V K K K P S A G L W E G Q T D E D E L G I S Y N L L D E I L W R M I D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T
S S B
T T T T S
T T
S
S S T T
T S
T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . .

Sequence K I G K E E I A K D L G I P L S L V E R V E E L I K K S E H K R R L P I G P S F E D L I V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
T T G G G S S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	R	I	L	D	Y	D	K	V	I	E	R	I	L	E	F	I	R	E	K	G	N	N	G	V	V	I	G	I	S	G	G	V	D	S	A	T	V	A	Y	L	A	T	K	A	L	G	K	E	K	V	L	G	L	I	M	P	Y	F	E	N	K	D	V	E	D	A	K	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T								S	S																G	G	G								S	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	E	K	L	G	I	G	Y	K	V	I	N	I	K	P	I	V	D	S	F	V	E	N	L	E	L	N	L	D	R	K	G	L	G	N	I	M	S	R	T	R	M	I	M	L	Y	A	H	A	N	S	L	G	R	I	V	L	G	T	S	N	R	S	E	F	L	T	G	Y	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T																					S																											T															T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	K	W	G	D	G	A	S	D	Y	A	P	I	I	N	L	Y	K	T	E	V	W	E	I	A	K	R	I	G	V	P	E	R	I	V	K	K	K	P	S	A	G	L	W	E	G	Q	T	D	E	D	E	L	G	I	S	Y	N	L	L	D	E	I	L	W	R	M	I	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T	T		S	S	B		T	T	T	T	S												T	T								S						S	S	T	T								T	S														T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Sequence	K	I	G	K	E	E	I	A	K	D	L	G	I	P	L	S	L	V	E	R	V	E	E	L	I	K	K	S	E	H	K	R	R	L	P	I	G	P	S	F	E	D	L	I	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	S														T	T	G	G	G	S	S								G	G	G