PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2e0zA_

Fold library id	PDB Header	Molecule	Title
c2e0zA_	PDB header: virus like particle	Chain: A: PDB Molecule: virus-like particle;	PDBTitle: crystal structure of virus-like particle from pyrococcus2 furiosus

Links to external resources
Added to library: Tue Mar 16 13:15:25 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V E Y F E K L R S A L L D G V N K G R S L L K H L P V T R I E G Q S F R V D I I K F E D G V R V V K Q E Y K P I P L L K K K F Y V G I R E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S
S S S
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N D G T Y D V S I A T K A G E L L V K D E E S L V I R E I L S T E G I K K M K L S S W D N P E E A L N D L M N A L Q E A S N A S A G P F G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T
T T
S T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I I N P K R Y A K L L K I Y E K S G K M L V E V L K E I F R G G I I V T L N I D E N K V I I F A N T P A V L D V V V G Q D V T L Q E L G P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S B
S T T S
B
T T
T T S
T T
S T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . .

Sequence G D D V A F L V S E A I G I R I K N P E A I V V L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	E	Y	F	E	K	L	R	S	A	L	L	D	G	V	N	K	G	R	S	L	L	K	H	L	P	V	T	R	I	E	G	Q	S	F	R	V	D	I	I	K	F	E	D	G	V	R	V	V	K	Q	E	Y	K	P	I	P	L	L	K	K	K	F	Y	V	G	I	R	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T							S						S	S	S										S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	D	G	T	Y	D	V	S	I	A	T	K	A	G	E	L	L	V	K	D	E	E	S	L	V	I	R	E	I	L	S	T	E	G	I	K	K	M	K	L	S	S	W	D	N	P	E	E	A	L	N	D	L	M	N	A	L	Q	E	A	S	N	A	S	A	G	P	F	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T				T																										T	T											S																	T	T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	I	N	P	K	R	Y	A	K	L	L	K	I	Y	E	K	S	G	K	M	L	V	E	V	L	K	E	I	F	R	G	G	I	I	V	T	L	N	I	D	E	N	K	V	I	I	F	A	N	T	P	A	V	L	D	V	V	V	G	Q	D	V	T	L	Q	E	L	G	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	B		S	T	T	S		B										T	T						T	T	S		T	T								S	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Sequence	G	D	D	V	A	F	L	V	S	E	A	I	G	I	R	I	K	N	P	E	A	I	V	V	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S															S		G	G	G