PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2dx7B_

Fold library id	PDB Header	Molecule	Title
c2dx7B_	PDB header: isomerase	Chain: B: PDB Molecule: aspartate racemase;	PDBTitle: crystal structure of pyrococcus horikoshii ot3 aspartate2 racemase complex with citric acid

Links to external resources
Added to library: Tue Mar 16 13:43:55 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K T I G I L G G M G P L A T A E L F R R I V I K T P A K R D Q E H P K V I I F N N P Q I P D R T A Y I L G K G E D P R P Q L I W T A K R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T S
S S G G G S
T T S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E E C G A D F I I M P A N T A H A F V E D I R K A I K I P I I S M I E E T A K K V K E L G F K K A G L L A T T G T I V S G V Y E K E F S K Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S G G G G G
S S
B
T T
S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G V E I M T P T E D E Q K D V M R G I Y E G V K A G N L K L G R E L L L K T A K I L E E R G A E C I I A G C T E V S V V L K Q D D L K V P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
T T
S S
S
G G G
S S

. . . . . . . . . 220 . . . . . . . .

Sequence I D P M D V I A E V A V K V A L E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	T	I	G	I	L	G	G	M	G	P	L	A	T	A	E	L	F	R	R	I	V	I	K	T	P	A	K	R	D	Q	E	H	P	K	V	I	I	F	N	N	P	Q	I	P	D	R	T	A	Y	I	L	G	K	G	E	D	P	R	P	Q	L	I	W	T	A	K	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S														T	S			S	S	G	G	G	S									T	T	S									S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	E	C	G	A	D	F	I	I	M	P	A	N	T	A	H	A	F	V	E	D	I	R	K	A	I	K	I	P	I	I	S	M	I	E	E	T	A	K	K	V	K	E	L	G	F	K	K	A	G	L	L	A	T	T	G	T	I	V	S	G	V	Y	E	K	E	F	S	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		S							S	G	G	G	G	G									S	S		B														T	T		S														T									T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	V	E	I	M	T	P	T	E	D	E	Q	K	D	V	M	R	G	I	Y	E	G	V	K	A	G	N	L	K	L	G	R	E	L	L	L	K	T	A	K	I	L	E	E	R	G	A	E	C	I	I	A	G	C	T	E	V	S	V	V	L	K	Q	D	D	L	K	V	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																								T	T																			T	T		S	S					S									G	G	G		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Sequence	I	D	P	M	D	V	I	A	E	V	A	V	K	V	A	L	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T