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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2dwqB_

Fold library idPDB HeaderMoleculeTitle
c2dwqB_PDB header: hydrolaseChain: B: PDB Molecule: gtp-binding protein;PDBTitle: thermus thermophilus ychf gtp-binding protein


Added to library: Tue Mar 16 13:10:13 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LAVGIVGLPNVGKSTLFNALTRANALAKNVGVVPLEDERLYALQRTFAKGERVPPVVPTHVEFVDIAGLV
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Known secondary structure (DSSP)



SSSST






T
BTTB




TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NQFLAHIREVAAIAHVLRCFPDPLEDAEVVETELLLADLATLERRLERLRKEARADRERLPLLEAAEGLY
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Known secondary structure (DSSP)
SS





SGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence VHLQEGKPARTFPPSEAVARFLKETPLLTAKPVIYVANVAEEDLPDGRGNPQVEAVRRKALEEGAEVVVV
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Known secondary structure (DSSP) TT

GGGS


SSTTS

GGGS




TTTTTTTTT
T
B

 .........220.........230.........240.........250.........260.........270.........280
Sequence SARLEAELAELSGEEARELLAAYGLQESGLQRLARAGYRALDLLTFFTAGEKEVRAWTVRRGTKAPRAAG
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Known secondary structure (DSSP)
TTTSTTT
SS
TT

SS
TT
B
 .........290.........300.........310.........320.........330.......
Sequence EIHSDMERGFIRAEVIPWDKLVEAGGWARAKERGWVRLEGKDYEVQDGDVIYVLFNA
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Known secondary structure (DSSP) TT
T
ST


SS
B

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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