Fold library entry viewer: c2dtuA_

Added to library: Tue Mar 16 14:41:28 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	E	F	Y	L	T	V	E	Q	I	G	D	S	I	F	E	R	Y	I	D	S	N	G	R	E	R	T	R	E	V	E	Y	K	P	S	L	F	A	H	C	P	E	S	Q	A	T	K	Y	F	D	I	Y	G	K	P	C	T	R	K	L	F	A	N	M	R	D	A	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T									T	T	S																			T	T	S			S				T	T	S									S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	I	K	R	M	E	D	I	G	L	E	A	L	G	M	D	D	F	K	L	A	Y	L	S	D	T	Y	N	Y	E	I	K	Y	D	H	T	K	I	R	V	A	N	F	D	I	E	V	T	S	P	D	G	F	P	E	P	S	Q	A	K	H	P	I	D	A	I	T	H	Y	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T				B	S													T		S						G	G	G	S												S	S	S	S			T	T	T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	I	D	D	R	F	Y	V	F	D	L	L	N	S	P	Y	G	N	V	E	E	W	S	I	E	I	A	A	K	L	Q	E	Q	G	G	D	E	V	P	S	E	I	I	D	K	I	I	Y	M	P	F	D	N	E	K	E	L	L	M	E	Y	L	N	F	W	Q	Q	K	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T											T	T													S		G	G	G	T						T	T	T	G	G	G							S	S															T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	I	L	T	G	W	N	V	E	S	F	A	I	P	Y	V	Y	N	R	I	K	N	I	F	G	E	S	T	A	K	R	L	S	P	H	R	K	T	R	V	K	V	G	E	I	I	T	L	F	G	I	S	V	L	D	Y	I	D	L	Y	K	K	F	S	F	T	N	Q	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					S	S	T	T	T	T													S						G	G	G	S	T	T	S						S	S	S					T	T														S					S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	S	L	D	Y	I	S	E	F	E	L	N	V	G	K	L	K	Y	D	G	P	I	S	K	L	R	E	S	N	H	Q	R	Y	I	S	Y	N	I	I	A	V	Y	R	V	L	Q	I	D	A	K	R	Q	F	I	N	L	S	L	D	M	G	Y	Y	A	K	I	Q	I	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S			S				S	S		G	G	G																																									T			G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	F	S	P	I	K	T	W	D	A	I	I	F	N	S	L	K	E	Q	N	K	V	I	P	Q	G	R	S	H	P	V	Q	P	Y	P	G	A	F	V	K	E	P	I	P	N	R	Y	K	Y	V	M	S	F	D	L	T	S	L	Y	P	S	I	I	R	Q	V	N	I	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G																	T	T																			B									S	S							S	S										T			G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	T	I	A	G	T	F	K	V	A	P	L	H	D	Y	I	N	A	V	A	E	R	P	S	D	V	Y	S	C	S	P	N	G	M	M	Y	Y	K	D	R	D	G	V	V	P	T	E	I	T	K	V	F	N	Q	R	K	E	H	K	G	Y	M	L	A	A	Q	R	N	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G															T	T		S			S		S	S	S				T	T	T					S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	I	K	E	A	L	H	N	P	N	L	S	V	D	E	P	L	D	V	D	Y	R	F	D	F	S	D	E	I	K	E	K	I	K	K	L	S	A	K	S	L	N	E	M	L	F	R	A	Q	R	T	E	V	A	G	M	T	A	Q	I	N	R	K	L	L	I	N	S	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	T	S													T	T	S											T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	A	L	G	N	V	W	F	R	Y	Y	D	L	R	N	A	T	A	I	T	T	F	G	Q	M	A	L	Q	W	I	E	R	K	V	N	E	Y	L	N	E	V	C	G	T	E	G	E	A	F	V	L	Y	G	D	T	D	S	I	Y	V	S	A	D	K	I	I	D	K	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	T	T																															T	T			S	S									T	T												T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	S	K	F	R	D	T	N	H	W	V	D	F	L	D	K	F	A	R	E	R	M	E	P	A	I	D	R	G	F	R	E	M	C	E	Y	M	N	N	K	Q	H	L	M	F	M	D	R	E	A	I	A	G	P	P	L	G	S	K	G	I	G	G	F	W	T	G	K	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G		S	S															T																T	T		S	S															T	T	S	S			S						T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Y	A	L	N	V	W	D	M	E	G	T	R	Y	A	E	P	K	L	K	I	M	G	L	E	T	Q	K	S	S	T	P	K	A	V	Q	K	A	L	K	E	C	I	R	R	M	L	Q	E	G	E	E	S	L	Q	E	Y	F	K	E	F	E	K	E	F	R	Q	L	N	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T												S	S	G	G	G		T	T	S																		T																G	G	G	S		T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	S	I	A	S	V	S	S	A	N	N	I	A	K	Y	D	V	G	G	F	P	G	P	K	C	P	F	H	I	R	G	I	L	T	Y	N	R	A	I	K	G	N	I	D	A	P	Q	V	V	E	G	E	K	V	Y	V	L	P	L	R	E	G	N	P	F	G	D	K	C	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								S	T	T	T	S			T	T				T	T																T	T		S	S	S					T	T	S							B		S	S		T	T		S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.
Sequence	W	P	S	G	T	E	I	T	D	L	I	K	D	D	V	L	H	W	M	D	Y	T	V	L	L	E	K	T	F	I	K	P	L	E	G	F	T	S	A	A	K	L	D	Y	E	K	K	A	S	L	F	D	M	F	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S				T	T	T								B										T												T			S	S	S	S			G	G	G	G	S

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PDB structure

FASTA sequence

Hidden Markov model

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