Fold library entry viewer: c2dtgE_

Added to library: Tue Mar 16 14:27:08 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	G	E	V	C	P	G	M	D	I	R	N	N	L	T	R	L	H	E	L	E	N	C	S	V	I	E	G	H	L	Q	I	L	L	M	F	K	T	R	P	E	D	F	R	D	L	S	F	P	K	L	I	M	I	T	D	Y	L	L	L	F	R	V	Y	G	L	E	S	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S	S	G	G	G	G	G	S	S	S													B	S	S			G	G	G	T	T	T					S					S	S						S	B	T	T			B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	L	F	P	N	L	T	V	I	R	G	S	R	L	F	F	N	Y	A	L	V	I	F	E	M	V	H	L	K	E	L	G	L	Y	N	L	M	N	I	T	R	G	S	V	R	I	E	K	N	N	E	L	C	Y	L	A	T	I	D	W	S	R	I	L	D	S	V	E	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T							S	S		B	T	T							S		T	T			B					S			B			S									S				B	T	S	S	S						S	S			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	I	V	L	N	K	D	D	N	E	E	C	G	D	I	C	P	G	T	A	K	G	K	T	N	C	P	A	T	V	I	N	G	Q	F	V	E	R	C	W	T	H	S	H	C	Q	K	V	C	P	T	I	C	K	S	H	G	C	T	A	E	G	L	C	C	H	S	E	C	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	T	T	S	S							S		T	T		S	S			S					G	G	G						B	S	S	S	S		B						T	T	T	G	G	G		B		S	S	S		B			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	N	C	S	Q	P	D	D	P	T	K	C	V	A	C	R	N	F	Y	L	D	G	R	C	V	E	T	C	P	P	P	Y	Y	H	F	Q	D	W	R	C	V	N	F	S	F	C	Q	D	L	H	H	K	C	K	N	S	R	R	Q	G	C	H	Q	Y	V	I	H	N	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S	S	S	S		G	G	G					S	S		B	B	T	T	B			S	S			S	S					T	T	S	B											S	S				S	T	T	T	T	S								T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	C	I	P	E	C	P	S	G	Y	T	M	N	S	S	N	L	L	C	T	P	C	L	G	P	C	P	K	V	C	H	L	L	E	G	E	K	T	I	D	S	V	T	S	A	Q	E	L	R	G	C	T	V	I	N	G	S	L	I	I	N	I	R	G	G	N	N	L	A	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S			S	S					S	S	S		B						S	S								T	T	S						S						T	T	T	T					S	S										S	S	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	E	A	N	L	G	L	I	E	E	I	S	G	Y	L	K	I	R	R	S	Y	A	L	V	S	L	S	F	F	R	K	L	R	L	I	R	G	E	T	L	E	I	G	N	Y	S	F	Y	A	L	D	N	Q	N	L	R	Q	L	W	D	W	S	K	H	N	L	T	I	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T					S	S						S		T	T		S	B	G	G	G	G	T	T							T	T		B	T	T	T							S		T	T			B	S			T	T	S				B		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	K	L	F	F	H	Y	N	P	K	L	C	L	S	E	I	H	K	M	E	E	V	S	G	T	K	G	R	Q	E	R	N	D	I	A	L	K	T	N	G	D	Q	A	S	C	E	N	E	L	L	K	F	S	Y	I	R	T	S	F	D	K	I	L	L	R	W	E	P	Y	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	B	T	T	S												T	T		S	S	S			S	S	S	B		S	T	T	B	S	T	T				S			B				S						S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	P	D	F	R	D	L	L	G	F	M	L	F	Y	K	E	A	P	Y	Q	N	V	T	E	F	D	G	Q	D	A	C	G	S	N	S	W	T	V	V	D	I	D	P	P	L	R	S	N	D	P	K	S	Q	N	H	P	G	W	L	M	R	G	L	K	P	W	T	Q	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S											S	S	S			T	T	T										S										S											S	S	S								S			S	S		B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	F	V	K	T	L	V	T	F	S	D	E	R	R	T	Y	G	A	K	S	D	I	I	Y	V	Q	T	D	A	T	N	P	S	V	P	L	D	P	I	S	V	S	N	S	S	S	Q	I	I	L	K	W	K	P	P	S	D	P	N	G	N	I	T	H	Y	L	V	F	W	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B										S	S							B				B			B																		S	S	S												S	S	S	S		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	R	Q	A	E	D	S	E	L	F	E	L	D	Y	C	L	K	G	L	K	L	P	S	E	H	R	P	F	E	K	V	V	N	K	E	S	L	V	I	S	G	L	R	H	F	T	G	Y	R	I	E	L	Q	A	C	N	Q	D	T	P	E	E	R	C	S	V	A	A	Y	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		T	T		S	S	S		S									S		S					S		S						S	S		S	S											S		S	S	S	S			B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	R	T	M	P	E	A	K	A	D	D	I	V	G	P	V	T	H	E	I	F	E	N	N	V	V	H	L	M	W	Q	E	P	K	E	P	N	G	L	I	V	L	Y	E	V	S	Y	R	R	Y	G	D	E	E	L	H	L	C	D	T	R	K	H	F	A	L	E	R	G	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S	S	S	S	S											S		S	S										B	S	S	S	B									S	S	S				T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.
Sequence	R	L	R	G	L	S	P	G	N	Y	S	V	R	I	R	A	T	S	L	A	G	N	G	S	W	T	E	P	T	Y	F	Y	V	T	D	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			S	S											T	T	B

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PDB structure

FASTA sequence

Hidden Markov model

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