PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2di3A_

Fold library id	PDB Header	Molecule	Title
c2di3A_	PDB header: transcription	Chain: A: PDB Molecule: bacterial regulatory proteins, gntr family;	PDBTitle: crystal structure of the transcriptional factor cgl29152 from corynebacterium glutamicum

Links to external resources
Added to library: Tue Mar 16 13:39:43 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S V K A H E S V M D W V T E E L R S G R L K I G D H L P S E R A L S E T L G V S R S S L R E A L R V L E A L G T I S T A T G S G P R S G T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S
T T
B
T
T S
S T T S G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I T A A P G Q A L S L S V T L Q L V T N Q V G H H D I Y E T R Q L L E G W A A L H S S A E R G D W D V A E A L L E K M D D P S L P L E D F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S S
T B
T T T S
T T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R F D A E F H V V I S K G A E N P L I S T L M E A L R L S V A D H T V A R A R A L P D W R A T S A R L Q K E H R A I L A A L R A G E S T V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T B S S T T
S
T T

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence A T L I K E H I E G Y Y E E T A A A E A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	V	K	A	H	E	S	V	M	D	W	V	T	E	E	L	R	S	G	R	L	K	I	G	D	H	L	P	S	E	R	A	L	S	E	T	L	G	V	S	R	S	S	L	R	E	A	L	R	V	L	E	A	L	G	T	I	S	T	A	T	G	S	G	P	R	S	G	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	S	S		T	T		B												T																	T	S					S	T	T	S	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	T	A	A	P	G	Q	A	L	S	L	S	V	T	L	Q	L	V	T	N	Q	V	G	H	H	D	I	Y	E	T	R	Q	L	L	E	G	W	A	A	L	H	S	S	A	E	R	G	D	W	D	V	A	E	A	L	L	E	K	M	D	D	P	S	L	P	L	E	D	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S												T	T	S	S																			T	B		T	T	T	S												T	T		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	F	D	A	E	F	H	V	V	I	S	K	G	A	E	N	P	L	I	S	T	L	M	E	A	L	R	L	S	V	A	D	H	T	V	A	R	A	R	A	L	P	D	W	R	A	T	S	A	R	L	Q	K	E	H	R	A	I	L	A	A	L	R	A	G	E	S	T	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	B	S	S																							T	T		S																						T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	A	T	L	I	K	E	H	I	E	G	Y	Y	E	E	T	A	A	A	E	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S