Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2cxiA_

Fold library idPDB HeaderMoleculeTitle
c2cxiA_PDB header: ligaseChain: A: PDB Molecule: phenylalanyl-trna synthetase beta chain;PDBTitle: crystal structure of an n-terminal fragment of the2 phenylalanyl-trna synthetase beta-subunit from pyrococcus3 horikoshii


Added to library: Tue Mar 16 12:19:43 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PKFDVSKSDLERLIGRSFSIEEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLWSAEGVARQIKW
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
TS


TTTT

TT
GGGSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALGIEKGLPKYEVKKSNVTVYVDEKLKDIRPYGVYAIVEGLRLDEDSLSQXIQLQEKIALTFGRRRREVA
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) TTSS
SS




GGGTTTS
S



TTTTTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IGIFDFDKIKPPIYYKAAEKTEKFAPLGYKEEXTLEEILEKHEKGREYGHLIKDKQFYPLLIDSEGNVLS
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) GGGS
SS
TT

BTT
SS
SGGGTTTSSSTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence XPPIINSEFTGRVTTDTKNVFIDVTGWKLEKVXLALNVXVTALAERGGKIRSVRVVYKDFEIETPDLTPK
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) TTTBSSSS


TT

SS
TTT

SS





 .........290.........300.........310.........320.........330.........340.......
Sequence EFEVELDYIRKLSGLELNDGEIKELLEKXXYEVEISRGRAKLKYPAFRDDIXHARDILEDVLIAYGY
Predicted secondary structure





















SS confidence


































































Known secondary structure (DSSP) T



TT
TT
TT




ST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D