Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2cw8A_

Fold library idPDB HeaderMoleculeTitle
c2cw8A_PDB header: hydrolaseChain: A: PDB Molecule: endonuclease pi-pkoii;PDBTitle: crystal structure of intein homing endonuclease ii


Added to library: Tue Mar 16 13:08:40 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SILPEEWLPVLEEGEVHFVRIGELIDRXXEENAGKVKREGETEVLEVSGLEVPSFNRRTNKAELKRVKAL
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)
B
TT
TTTTGGG
TT

S
TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence IRHDYSGKVYTIRLKSGRRIKITSGHSLFSVRNGELVEVTGDELKPGDLVAVPRRLELPERNHVLNLVEL
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) TTS
TT
TTTTT

TT
S








 .........150.........160.........170.........180.........190.........200.........210
Sequence LLGTPEEETLDIVXTIPVKGKKNFFKGXLRTLRWIFGEEKRPRTARRYLRHLEDLGYVRLKKIGYEVLDW
Predicted secondary structure






















































SS confidence





































































Known secondary structure (DSSP) TS
GGGSTT
SSS
TTTTSS


TTTS
SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DSLKNYRRLYEALVENVRYNGNKREYLVEFNSIRDAVGIXPLKELKEWKIGTLNGFRXRKLIEVDESLAK
Predicted secondary structure
















































SS confidence





































































Known secondary structure (DSSP)

TTTS
BGGGGTTS
TT

TTS
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence LLGYYVSEGYARKQRNPKNGWSYSVKLYNEDPEVLDDXERLASRFFGKVRRGRNYVEIPKKIGYLLFENX
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)
TTTTS

S
SS

SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence CGVLAENKRIPEFVFTSPKGVRLAFLEGYFIGDGDVHPNKRLRLSTKSELLANQLVLLLNSVGVSAVKLG
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
SSGGG



TS
T
SS
SSSS
TT


 .........430.........440.........450.........460.........470.........480.........490
Sequence HDSGVYRVYINEELPFVKLDKKKNAYYSHVIPKEVLSEVFGKVFQKNVSPQTFRKXVEDGRLDPEKAQRL
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
SS

S
BTTB


TTTT

GGG
B
SS

SS
B
TTSS
GGG
 .........500.........510.........520.........530.......
Sequence SWLIEGDVVLDRVESVDVEDYDGYVYDLSVEDNENFLVGFGLVYAHN
Predicted secondary structure













SS confidence














































Known secondary structure (DSSP) SSTTT
TBTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D