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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2c8iB_

Fold library idPDB HeaderMoleculeTitle
c2c8iB_PDB header: virus/receptorChain: B: PDB Molecule: echovirus 11 coat protein vp2;PDBTitle: complex of echovirus type 12 with domains 1, 2, 3 and 4 of2 its receptor decay accelerating factor (cd55) by cryo3 electron microscopy at 16 a


Added to library: Tue Mar 16 12:55:54 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SDRVRSITLGNSTITTQESANVVVGYGRWPEYLRDDEATAEDQPTQPDVATCRFYTLESVTWEKDSPGWW
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Known secondary structure (DSSP)
TT
TTSS



BTTB





STT



S

B

TTTSSS





TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence WKFPDALKDMGLFGQNMYYHYLGRAGYTIHVQCNASKFHQGCLLVVCVPEAEMGCSTVDGTVNEHGLSEG
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Known secondary structure (DSSP) STTTTTSSTTTTT



TT
S



BSSSSS


TTTT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ETAKKFSATGTNGTNTVQSIVTNAGMGVGVGNLTIFPHQWINLRTNNCATIVMPYINNVPMDNMFRHHNF
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Known secondary structure (DSSP) SS

BSS


STTSB

BTTTTSSSS
GGGGGGSS

TTT
S




SSS
B
TTT


 .........220.........230.........240.........250..
Sequence TLMIIPFVPLNYSSDFSTYVPITVTVAPMCAEYNGLRLSTAL
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Known secondary structure (DSSP)
SS
S




S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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