PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2c37L_

Fold library id	PDB Header	Molecule	Title
c2c37L_	PDB header: hydrolase	Chain: L: PDB Molecule: probable exosome complex exonuclease 1;	PDBTitle: rnase ph core of the archaeal exosome in complex with u82 rna

Links to external resources
Added to library: Tue Mar 16 12:36:50 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R E M L Q V E R P K L I L D D G K R T D G R K P D E L R S I K I E L G V L K N A D G S A I F E M G N T K A I A A V Y G P K E M H P R H L S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S B
S T T
B T T S
T T B
T T S S T T
S S G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P D R A V L R V R Y H M T P F S T D E R K N P A P S R R E I E L S K V I R E A L E S A V L V E L F P R T A I D V F T E I L Q A D A G S R L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T S S S S
S S
T T B
G G G S T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S L M A A S L A L A D A G I P M R D L I A G V A V G K A D G V I I L D L N E T E D M W G E A D M P I A M M P S L N Q V T L F Q L N G S M T P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B S S
S S S
S
S T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . .

Sequence D E F R Q A F D L A V K G I N I I Y N L E R E A L K S K Y V E F K E E G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	E	M	L	Q	V	E	R	P	K	L	I	L	D	D	G	K	R	T	D	G	R	K	P	D	E	L	R	S	I	K	I	E	L	G	V	L	K	N	A	D	G	S	A	I	F	E	M	G	N	T	K	A	I	A	A	V	Y	G	P	K	E	M	H	P	R	H	L	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S			S	B		S	T	T		B	T	T	S			T	T	B												T	T	S	S								T	T														S	S	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	D	R	A	V	L	R	V	R	Y	H	M	T	P	F	S	T	D	E	R	K	N	P	A	P	S	R	R	E	I	E	L	S	K	V	I	R	E	A	L	E	S	A	V	L	V	E	L	F	P	R	T	A	I	D	V	F	T	E	I	L	Q	A	D	A	G	S	R	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S											T	T	S	S	S	S				S	S																		T	T	B		G	G	G	S	T	T													S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	L	M	A	A	S	L	A	L	A	D	A	G	I	P	M	R	D	L	I	A	G	V	A	V	G	K	A	D	G	V	I	I	L	D	L	N	E	T	E	D	M	W	G	E	A	D	M	P	I	A	M	M	P	S	L	N	Q	V	T	L	F	Q	L	N	G	S	M	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T			B	S	S										S	S	S					S										S									T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Sequence	D	E	F	R	Q	A	F	D	L	A	V	K	G	I	N	I	I	Y	N	L	E	R	E	A	L	K	S	K	Y	V	E	F	K	E	E	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												S								B