Fold library entry viewer: c2bviK_

Added to library: Tue Mar 16 12:09:50 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	M	P	Q	W	S	Y	M	H	I	S	G	Q	D	A	S	E	Y	L	S	P	G	L	V	Q	F	A	R	A	T	E	T	Y	F	S	L	N	N	K	F	R	N	P	T	V	A	P	T	H	D	V	T	T	D	R	S	Q	R	L	T	L	R	F	I	P	V	D	R	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S	S	S							S												T	T	T	S			G	G	G	S									S	S	S	B		S	S				S							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	A	Y	S	Y	K	A	R	F	T	L	A	V	G	D	N	R	V	L	D	M	A	S	T	Y	F	D	I	R	G	V	L	D	R	G	P	T	F	K	P	Y	S	G	T	A	Y	N	A	L	A	P	K	G	A	P	N	P	C	E	W	D	T	H	V	F	G	Q	A	P	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S												T	T					G	G	G													T	T		B		S	S	S		S	S		T	T	S		T	T		B		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	G	I	N	I	T	K	E	G	I	Q	I	G	K	Y	A	D	K	T	F	Q	P	E	P	Q	I	G	E	S	Q	W	Y	E	T	E	I	N	H	A	A	G	R	V	L	K	K	T	T	P	M	K	P	C	Y	G	S	Y	A	K	P	T	N	E	N	G	G	Q	G	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				T	T			B				B			T	T	T		S		T	T				S		S	S					S	S								T	T	S				B	S	T	T						S	S	T	T	S			B		B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	E	S	Q	V	E	M	Q	F	F	S	T	T	N	L	T	P	K	V	V	L	Y	S	E	D	V	D	I	E	T	P	D	T	H	I	S	Y	M	P	T	I	K	E	G	N	S	R	E	L	M	G	Q	Q	S	M	P	N	R	P	N	Y	I	A	F	R	D	N	F	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B															S								B					T	T							S		S			S			G	G	G	G	G									B						G	G	G	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	M	Y	Y	N	S	T	G	N	M	G	V	L	A	G	Q	A	S	Q	L	N	A	V	V	D	L	Q	D	R	N	T	E	L	S	Y	Q	L	L	L	D	S	I	G	D	R	T	R	Y	F	S	M	W	N	Q	A	V	D	S	Y	D	P	D	V	R	I	I	E	N	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B			S		G	G	G							T	T	T				S					T	T															S		T	T	S		B	G	G	G	T	B											S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	E	D	E	L	P	N	Y	C	F	P	L	G	G	V	I	N	T	E	T	L	T	K	V	K	P	G	W	E	K	D	A	F	S	D	K	N	E	I	R	V	G	N	N	F	A	M	E	I	N	L	N	A	N	L	W	R	N	F	L	Y	S	N	I	A	L	Y	L	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S							T	T	S																					S							S	S																					T	G	G	G	S		G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	L	K	Y	S	P	S	N	V	K	I	S	D	N	P	N	T	Y	D	Y	M	N	K	R	V	V	A	P	G	L	V	D	C	Y	I	N	L	G	A	R	W	S	L	D	Y	M	D	N	V	N	P	F	N	H	H	R	N	A	G	L	R	Y	R	S	M	L	L	G	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G		B			T	T					S		T	T	S								B			G	G	G	G		T	T	T	T	T	T						T	T	T	T	T	S		T	T	S	S	T	T													S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	Y	V	P	F	H	I	Q	V	P	Q	K	F	F	A	I	K	N	L	L	L	L	P	G	S	Y	T	Y	E	W	N	F	R	K	D	V	N	M	V	L	Q	S	S	L	G	N	D	L	R	V	D	G	A	S	I	K	F	D	S	I	C	L	Y	A	T	F	F	P	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S													T	T	T	T	T					S																				S	S				T	T	T	T	T																	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	H	N	T	A	S	T	L	E	A	M	L	R	N	D	T	N	D	Q	S	F	N	D	Y	L	S	A	A	N	M	L	Y	P	I	P	A	N	A	T	N	V	P	I	S	I	P	S	R	N	W	A	A	F	R	G	W	A	F	T	R	L	K	T	K	E	T	P	S	L	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	S	G	G	G							S	S											T	T														T	T											G	G	G					S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	Y	D	P	Y	Y	T	Y	S	G	S	I	P	Y	L	D	G	T	F	Y	L	N	H	T	F	K	K	V	A	I	T	F	D	S	S	V	S	W	P	G	N	D	R	L	L	T	P	N	E	F	E	I	K	R	S	V	D	G	E	G	Y	N	V	A	Q	C	N	M	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T					S												G	G	G									T	T	T				S		T	T		S	S	S	T	T	S				B			S	T	T	G	G	G	B		T	T	S	S	B	B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	D	W	F	L	V	Q	M	L	A	N	Y	N	I	G	Y	Q	G	F	Y	I	P	E	S	Y	K	D	R	M	Y	S	F	F	R	N	F	Q	P	M	S	R	Q	V	V	D	D	T	K	Y	K	D	Y	Q	Q	V	G	I	L	H	Q	H	N	N	S	G	F	V	G	Y	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S		S	T	T							T	T	T	S		T	T																T	T	T		T	T						G	G	G			S	S	T	T	T	B		S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	P	T	M	R	E	G	Q	A	Y	P	A	N	F	P	Y	P	L	I	G	K	T	A	V	D	S	I	T	Q	K	K	F	L	C	D	R	T	L	W	R	I	P	F	S	S	N	F	M	S	M	G	A	L	T	D	L	G	Q	N	L	L	Y	A	N	S	A	H	A	L	D	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S			B	S								S				S	S	T	T													T	T							S	S	T	T	S			S		S	S		S	G	G	G						S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.
Sequence	T	F	E	V	D	P	M	D	E	P	T	L	L	Y	V	L	F	E	V	F	D	V	V	R	V	H	R	P	H	R	G	V	I	E	T	V	Y	L	R	T	P	F	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S																				S	T	T										S	S

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PDB structure

FASTA sequence

Hidden Markov model

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