Fold library entry viewer: c2btvB_

Added to library: Tue Mar 16 12:57:22 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	R	P	E	R	I	K	T	T	P	Y	L	E	G	D	V	L	S	S	D	S	G	P	L	L	S	V	F	A	L	Q	E	I	M	Q	K	V	R	Q	V	Q	A	D	Y	M	T	A	T	R	E	V	D	F	T	V	P	D	V	Q	Q	I	L	D	D	I	K	A	L	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T				S	G	G	G																														T	T	S				S																			T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	Q	V	Y	K	I	V	K	V	P	S	T	S	F	R	H	I	V	T	Q	S	R	D	R	V	L	R	V	D	T	Y	Y	E	E	M	S	Q	V	G	D	V	I	T	E	D	E	P	E	K	F	Y	S	T	I	I	K	K	V	R	F	I	R	G	K	G	S	F	I	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S					S	S											S		S	S														T	S	S					S	S																									B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	I	P	A	R	D	H	R	G	M	E	V	A	E	P	E	V	L	G	V	E	F	K	N	V	L	P	V	L	T	A	E	H	R	A	M	I	Q	N	A	L	D	G	S	I	I	E	N	G	N	V	A	T	R	D	V	D	V	F	I	G	A	C	S	E	P	I	Y	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							T	T						G	G	G	S	S				T	T	T	G	G	G														T	T	S	B		T	T		T	T	S	S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	N	R	L	Q	G	Y	I	E	A	V	Q	L	Q	E	L	R	N	S	I	G	W	L	E	R	L	G	Q	R	K	R	I	T	Y	S	Q	E	V	L	T	D	F	R	R	Q	D	M	I	W	V	L	A	L	Q	L	P	V	N	P	Q	V	V	W	D	V	P	R	S	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S																		T	T					S			B						T	T							B		S	S									S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	N	L	I	M	N	I	A	T	C	L	P	T	G	E	Y	I	A	P	N	P	R	I	S	S	I	T	L	T	Q	R	I	T	T	T	G	P	F	A	I	L	T	G	S	T	P	T	A	Q	Q	L	N	D	V	R	K	I	Y	L	A	L	M	F	P	G	Q	I	I	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					G	G	G	T			B	S	S	S	S		B				S		T	T	T	T																				T	S	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	K	I	D	P	G	E	R	M	D	P	A	V	R	M	V	A	G	V	V	G	H	L	L	F	T	A	G	G	R	F	T	N	L	T	Q	N	M	A	R	Q	L	D	I	A	L	N	D	Y	L	L	Y	M	Y	N	T	R	V	Q	V	N	Y	G	P	T	G	E	P	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S				T														S				T	T	T		S	B																	S			S	S	S				B				S	S		S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	Q	I	G	R	N	Q	Y	D	C	N	V	F	R	A	D	F	A	T	G	T	G	Y	N	G	W	A	T	I	D	V	E	Y	R	D	P	A	P	Y	V	H	A	Q	R	Y	I	R	Y	C	G	I	D	S	R	E	L	I	N	P	T	T	Y	G	I	G	M	T	Y	H	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	S	T	T				S	S	T	T	S			T	T	T			S	S	S	S	S	S				B				S			S	S	S	S					B		G	G	G			T					S		S	S		S	S					T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Y	N	E	M	L	R	M	L	V	A	A	G	K	D	S	E	A	A	Y	F	R	S	M	L	P	F	H	M	V	R	F	A	R	I	N	Q	I	I	N	E	D	L	H	S	V	F	S	L	P	D	D	M	F	N	A	L	L	P	D	L	I	A	G	A	H	Q	N	A	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S																												T	T	T			G	G	G																T				S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	V	L	D	V	S	W	I	S	L	W	F	A	F	N	R	S	F	E	P	T	H	R	N	E	M	L	E	I	A	P	L	I	E	S	V	Y	A	S	E	L	S	V	M	K	V	D	M	R	H	L	S	L	M	Q	R	R	F	P	D	V	L	I	Q	A	R	P	S	H	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T										T	T	T	T	T																														T	T	T		S	S			T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	W	K	A	V	L	N	D	S	P	E	A	V	K	A	V	M	N	L	S	H	S	H	N	F	I	N	I	R	D	M	M	R	W	V	L	L	P	S	L	Q	P	S	L	K	L	V	L	E	E	E	A	W	A	A	A	N	D	F	E	D	L	M	L	T	D	Q	V	Y	M	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S									G	G	G	T	G	G	G	T																		B														T	T	S	T	T	T	T	B		S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	D	M	L	P	E	P	R	L	D	D	I	E	R	F	R	Q	E	G	F	Y	Y	T	N	M	L	E	A	P	P	E	I	D	R	V	V	Q	Y	T	Y	E	I	A	R	L	Q	A	N	M	G	Q	F	R	A	A	L	R	R	I	M	D	D	D	D	W	V	R	F	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S		G	G	G	G		S	S	T	T				S	B		S	S				G	G	G															T	T												T	T							S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	V	L	R	T	V	R	V	K	F	F	D	A	R	P	P	D	D	I	L	Q	G	L	P	F	S	Y	D	T	I	K	Y	A	T	E	T	T	I	F	Y	L	I	Y	N	V	E	F	S	N	T	P	D	S	L	V	L	I	N	P	T	Y	T	M	T	K	V	F	I	N	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B							S	S								T			S	S																						T	T			G	G	G	G			S	S											S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.
Sequence	I	V	E	R	V	R	V	G	Q	I	L	A	V	L	N	R	R	F	V	A	Y	K	G	K	M	R	I	M	D	I	T	Q	S	L	K	M	G	T	K	L	A	A	P	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						S	T	T	G	G	G	G	T	T								T	T								S				T	T			B	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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