PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2bgcA_

Fold library id	PDB Header	Molecule	Title
c2bgcA_	PDB header: transcription	Chain: A: PDB Molecule: prfa;	PDBTitle: prfa-g145s, a constitutive active mutant of the2 transcriptional regulator in l.monocytogenes

Links to external resources
Added to library: Tue Mar 16 12:02:52 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A Q A E E F K K Y L E T N G I K P K Q F H K K E L I F N Q W D P Q E Y C I F L Y D G I T K L T S I S E N G T I M N L Q Y Y K G A F V I M S G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T
S
T T S
S S S B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F I D T E T S V G Y Y N L E V I S E Q A T A Y V I K I N E L K E L L S K N L T H F F Y V F Q T L Q K Q V S Y S L A K F N D F S I N G K L G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
B S
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I C S Q L L I L T Y V Y G K E T P D G I K I T L D N L T M Q E L G Y S S G I A H S S A V S R I I S K L K Q E K V I V Y K N S C F Y V Q N L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T
T T S T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . .

Sequence Y L K R Y A P K L D E W F Y L A P A T W G K L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	Q	A	E	E	F	K	K	Y	L	E	T	N	G	I	K	P	K	Q	F	H	K	K	E	L	I	F	N	Q	W	D	P	Q	E	Y	C	I	F	L	Y	D	G	I	T	K	L	T	S	I	S	E	N	G	T	I	M	N	L	Q	Y	Y	K	G	A	F	V	I	M	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T								T	T						T	T												S									T	T	S										S	S					S	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	I	D	T	E	T	S	V	G	Y	Y	N	L	E	V	I	S	E	Q	A	T	A	Y	V	I	K	I	N	E	L	K	E	L	L	S	K	N	L	T	H	F	F	Y	V	F	Q	T	L	Q	K	Q	V	S	Y	S	L	A	K	F	N	D	F	S	I	N	G	K	L	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T			B	S									S	S																																														T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	C	S	Q	L	L	I	L	T	Y	V	Y	G	K	E	T	P	D	G	I	K	I	T	L	D	N	L	T	M	Q	E	L	G	Y	S	S	G	I	A	H	S	S	A	V	S	R	I	I	S	K	L	K	Q	E	K	V	I	V	Y	K	N	S	C	F	Y	V	Q	N	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T							S											T	T																	T	T	S					T	T					S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Sequence	Y	L	K	R	Y	A	P	K	L	D	E	W	F	Y	L	A	P	A	T	W	G	K	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T