Fold library entry viewer: c2berA_

Added to library: Tue Mar 16 14:38:20 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	E	P	L	Y	T	E	Q	D	L	A	V	N	G	R	E	G	F	P	N	Y	R	I	P	A	L	T	V	T	P	D	G	D	L	L	A	S	Y	D	G	R	P	T	G	I	D	A	P	G	P	N	S	I	L	Q	R	R	S	T	D	G	G	R	T	W	G	E	Q	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	B	T	T	B	S											T	T	S										T	T	S		S	T	T	S										S	S	T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	S	A	G	Q	T	T	A	P	I	K	G	F	S	D	P	S	Y	L	V	D	R	E	T	G	T	I	F	N	F	H	V	Y	S	Q	R	Q	G	F	A	G	S	R	P	G	T	D	P	A	D	P	N	V	L	H	A	N	V	A	T	S	T	D	G	G	L	T	W	S	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B	S	S	S	S		B											T	T	T											S	S			T	T	T			S				T	T		T	T	S									S	S	T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	T	I	T	A	D	I	T	P	D	P	G	W	R	S	R	F	A	A	S	G	E	G	I	Q	L	R	Y	G	P	H	A	G	R	L	I	Q	Q	Y	T	I	I	N	A	A	G	A	F	Q	A	V	S	V	Y	S	D	D	H	G	R	T	W	R	A	G	E	A	V	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	G	G	G		S	S	T	T								S								S	S	T	T	T	T											T	T	S										S	S	T	T	S	S							B		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	M	D	E	N	K	T	V	E	L	S	D	G	R	V	L	L	N	S	R	D	S	A	R	S	G	Y	R	K	V	A	V	S	T	D	G	G	H	S	Y	G	P	V	T	I	D	R	D	L	P	D	P	T	N	N	A	S	I	I	R	A	F	P	D	A	P	A	G	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S							T	T	S									T	T			S								S	S	T	T	S														S	S								S	S	T	T	S		T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	A	K	V	L	L	F	S	N	A	A	S	Q	T	S	R	S	Q	G	T	I	R	M	S	C	D	D	G	Q	T	W	P	V	S	K	V	F	Q	P	G	S	M	S	G	S	T	L	T	A	L	P	D	G	T	Y	G	L	L	Y	E	P	G	T	G	I	R	Y	A	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G										S	S	S	S									S	S	T	T	S																						T	T	S									S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	L	A	W	L	G	G	I	C	A	P	F	T	I	P	D	V	A	L	E	P	G	Q	Q	V	T	V	P	V	A	V	T	N	Q	S	G	I	A	V	P	K	P	S	L	Q	L	D	A	S	P	D	W	Q	V	Q	G	S	V	E	P	L	M	P	G	R	Q	A	K	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B		S												T	T													S	S	S		B	S	S									T	T	S									B		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	T	I	T	V	P	A	G	T	T	P	G	R	Y	R	V	G	A	T	L	R	T	S	A	G	N	A	S	T	T	F	T	V	T	V	G	L	L	D	Q	A	R	M	S	I	A	D	V	D	S	E	E	T	A	R	E	D	G	R	A	S	N	V	I	D	G	N	P	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T															T	T												S	B			G	G	G							S					S	S	S				G	G	G	G	G	S	S		T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	W	H	T	E	W	S	R	A	D	A	P	G	Y	P	H	R	I	S	L	D	L	G	G	T	H	T	I	S	G	L	Q	Y	T	R	R	Q	N	S	A	N	E	Q	V	A	D	Y	E	I	Y	T	S	L	N	G	T	T	W	D	G	P	V	A	S	G	R	F	T	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	T	T				S	S																						S	S		S	T	T	B	B									S	S	S	S	S												S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
Sequence	L	A	P	Q	R	A	V	F	P	A	R	D	A	R	Y	I	R	L	V	A	L	S	E	Q	T	G	H	K	Y	A	A	V	A	E	L	E	V	E	G	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																					B	T	T			S					S

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PDB structure

FASTA sequence

Hidden Markov model

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