PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2bcfA_

Fold library id	PDB Header	Molecule	Title
c2bcfA_	PDB header: hydrolase	Chain: A: PDB Molecule: probable d-alanyl-d-alanine carboxypeptidase	PDBTitle: crystal structure of a evolved putative penicillin-binding2 protein homolog, rv2911, from mycobacterium tuberculosis.

Links to external resources
Added to library: Tue Mar 16 14:12:24 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V Q P A G S V P I P D G P A Q T W I V A D L D S G Q V L A G R D Q N V A H P P A S T I K V L L A L V A L D E L D L N S T V V A D V A D T Q A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S T T T
S T T
B
G G G
T T
T G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E C N C V G V K P G R S Y T V R Q L L D G L L L V S G N D A A N T L A H X L G G Q D V T V A K X N A K A A T L G A T S T H A T T P S G L D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T
S
T T
T
T T
B
S S S S S S
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P G G S G A S T A H D L V V I F R A A X A N P V F A Q I I A E P S A X F P S D E Q L I V N Q D E L L Q R Y P G A I G G K T G Y T N A A R K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T B S
B B
S
S
T S T T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 .

Sequence F V G A A A R G G R R L V I A X X Y G L V K E G G P T Y W D Q A A T L F D W G F A L N P Q A S V G S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
S
T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	Q	P	A	G	S	V	P	I	P	D	G	P	A	Q	T	W	I	V	A	D	L	D	S	G	Q	V	L	A	G	R	D	Q	N	V	A	H	P	P	A	S	T	I	K	V	L	L	A	L	V	A	L	D	E	L	D	L	N	S	T	V	V	A	D	V	A	D	T	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T								S		S							T	T	T								S	T	T			B			G	G	G															T	T							T	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	C	N	C	V	G	V	K	P	G	R	S	Y	T	V	R	Q	L	L	D	G	L	L	L	V	S	G	N	D	A	A	N	T	L	A	H	X	L	G	G	Q	D	V	T	V	A	K	X	N	A	K	A	A	T	L	G	A	T	S	T	H	A	T	T	P	S	G	L	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S							T	T															S													T	T																	T		T	T		B		S	S	S	S	S	S		B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	G	G	S	G	A	S	T	A	H	D	L	V	V	I	F	R	A	A	X	A	N	P	V	F	A	Q	I	I	A	E	P	S	A	X	F	P	S	D	E	Q	L	I	V	N	Q	D	E	L	L	Q	R	Y	P	G	A	I	G	G	K	T	G	Y	T	N	A	A	R	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	B	S		B	B															S										S																T					S	T	T										T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Sequence	F	V	G	A	A	A	R	G	G	R	R	L	V	I	A	X	X	Y	G	L	V	K	E	G	G	P	T	Y	W	D	Q	A	A	T	L	F	D	W	G	F	A	L	N	P	Q	A	S	V	G	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T														T	T																		S		T	T			S